Primulina tabacum: 142519022
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Entry
142519022 CDS
T11246
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ptab Primulina tabacum
Pathway
ptab03082
ATP-dependent chromatin remodeling
ptab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142519022
03083 Polycomb repressive complex
142519022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142519022
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
142519022
Histone modification proteins
HAT complexes
HATB complex
142519022
HDAC complexes
Sin3A-HDAC complex
142519022
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
142519022
PRC2.2
142519022
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
142519022
Heterochromatin formation proteins
Other heterochromatin formation proteins
142519022
Chromatin remodeling factors
NuRD complex
142519022
NuRF complex
142519022
NuRF complex (fruit fly)
142519022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
WD40_RFWD3
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
DUF6922
Motif
Other DBs
NCBI-GeneID:
142519022
NCBI-ProteinID:
XP_075478012
LinkDB
All DBs
Position
11:complement(36585999..36589149)
Genome browser
AA seq
398 aa
AA seq
DB search
MEVVVEEEFSVWKKNTPLLYDLVICHSLEWPSLTVQWLPSLSLSLSQSGGGDLSVHKLIL
GTHTSDDVPNFLMVAHAYLPRDPTSAIEVDLDNSVIPKAEIVQKIQVDGEVNRARCMPQN
DAIVASKTNGTEVYVFDCTKQLLNTRHGCSDPDLRLKGHEKEGYGLSFSPSKEGYLLSGS
NDCKICLWDISATPQDKVLDAKYIYEGHDNVVEDVSWHSKNENLFGSVGDDCKLMIWDLR
TNKFQHSVIVHEKEVNYLSFNPFNEWVLATASSDTTVGLFDIRNLSSPLHALSSHMEEVF
QVEWDPNHETVLASSADDRRLMVWDINRVGDEQLEGEAEDGPPELLFSHGGHKAKISDFS
WNKNQAWVISSVAEDNTAQVWQMAESIYRDEDDIQTAD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtggtggaggaggagttctcggtgtggaagaagaacacgccgttgttgtac
gacctcgttatctgccactctctcgagtggccgtctctcacggttcagtggttgccgtcg
ctgtctctgtcgctgtcgcagtccggaggcggtgatctgtccgttcataagttgattctg
ggtacgcacacttctgatgacgtccccaacttcctcatggtcgcgcatgcttaccttccc
cgagaccccacctctgcgatcgaagtcgacctcgataattcagttattcccaaggccgag
atagttcaaaagatacaagttgatggagaagtgaacagggcccgctgcatgccacaaaat
gacgcaatagttgcttcaaagacaaatggtactgaagtatatgtgttcgactgtactaag
caattgttgaataccagacatggttgtagtgatcctgacttgagattgaagggacatgaa
aaagaaggatatggtttatcatttagcccttctaaagaaggatatcttctaagtggttca
aatgattgcaaaatttgcttgtgggatatttctgcaacgcctcaagataaagtacttgac
gctaaatatatttacgagggccacgataatgtggttgaggatgtgtcatggcattccaag
aatgaaaatttatttgggtctgtgggagatgattgcaagctaatgatatgggacttgcgc
acaaacaagttccaacactctgttattgtacacgagaaagaggtgaactatttatctttc
aatccatttaacgagtgggttttggccactgcttcctccgacactacagttgggctgttc
gacatccggaacttgagttctccactgcatgctctcagcagtcatatggaggaggtattt
caggtagaatgggatcctaaccatgaaactgttcttgcatcttctgctgatgacaggaga
ttgatggtttgggacattaacagagtgggagatgagcaattggaaggtgaagcagaagat
ggtcctcctgagctcctcttttctcatggtggtcacaaagcgaagatttccgacttttca
tggaacaagaaccaggcatgggtaatttcgagtgtagcagaggacaatactgctcaggtg
tggcaaatggcggaaagcatctaccgagatgaggatgacatccaaaccgcagattga
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