KEGG   Primulina tabacum: 142519214
Entry
142519214         CDS       T11246                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
ptab  Primulina tabacum
Pathway
ptab03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    142519214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptab03021]
    142519214
Enzymes [BR:ptab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     142519214
Transcription machinery [BR:ptab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     142519214
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 142519214
NCBI-ProteinID: XP_075478270
LinkDB
Position
11:39757611..39765753
AA seq 1207 aa
MGGSDFPKAGPSGVNEKFSNGTTRMDIFDDMDFVCSDSEDDDVGSSFQESDEGSLKTFCK
KASTAFFDQYGLISHQINSYNDFVKYGMQQLFDSIGEIVISPGYDPSKRRDDGWRQASLK
FGKVTLEKPMFWTGDKFSADGGKDYLNLLPRHARLQNMTYSSKIRVDARLEVFTENLASS
DKFKTGVQQQVEKTVLSVHQSDILFGSLPVMVKSDLCNEKGTEKMDCEFDHGGYFIIKGA
EKTFIAQEQMCLKRLWIAKDPNWSIAYRSVAKRKKVHVKLVPKVEHISGGEKILSVYFMA
TEVPIWILFFALDVSNDLEVVKLIDLDIEDCRVANVLVASIHVADKNYEGFRKADNAVNH
IKKLMQGCKFPPTESVEECFKNYFFPNLKSLGQKARFLAYMVKCLLEAYMGLHKVDSRDD
FRNKRLELANELLERELRVHIKHAERRMVKAMQRDLYGDREIQSIEHYLDTSIITNGLSR
AFSTGAWSHPYKKMERISGVVATLRRTNPLQATCDMRKTRQQVSYTGRAGDARYPHPSHW
GKICFLSTPDGENCGLVKNLASLGLVSTNVLEKDGLLRKLRQCGMENLVDDTSTSLKGKQ
KVLLDGDWIGVVENSASFVVKLRRKRRRMEVPHQVEIKRDEHHCEVRIFADSGRILRPLL
VVRNLKKIKEVKGDYTFQTLLDNGIIELVGPEEEEDCQTAWGIRYLFTTEKSRLPVKYTH
CELDCSFLLGLSCGMIPFTNHDHAKRVLYQSEKHSQQAIGFSTTNPNARVDTNSHQLYYP
QRPLFRTMLSDCLGKSSYSHQQRGMIPHPEFSNGQCAIVSVNVHLGYNQEDSIVMNRSSL
ERGMFRSEHIRSYKTEVESSEGLGKKLKPEDYISFGKTQSKIGRVDSLDDDGLPFIGANL
QTGDIVIGKHSESGVDHSIKLRHTERGMVHKVVLSANDDGKNFAVVSLGQVRSPCLGDKF
SSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLESALGKGIALGGA
LKHATPFSTPSVEDITAQLHRLGFSRWGHERVYDGRTGEAVRSLIFMGPTFYQRLTHMAE
DKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANLHERLFTLSDSSQI
HICRSCKNVANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLLCQELFSMGISL
KFDTELC
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgggtggatccgattttccgaaagctggacctagtggcgtcaatgagaagttttccaat
ggcaccaccagaatggatattttcgatgatatggactttgtatgttctgattctgaagat
gatgatgtgggcagttcttttcaagaatcagatgaagggtcgttgaaaactttctgtaag
aaggcttcgaccgccttttttgatcagtatgggctaattagtcaccaaattaattcatat
aacgactttgttaagtatgggatgcaacaattgtttgactctattggtgagattgttatc
tcgcctgggtatgatccatcgaaaaggagagatgatggttggaggcaggcgtctctcaaa
tttggaaaggtcacccttgagaagcctatgttttggactggcgataagttttcagctgat
ggtgggaaggattatttgaatttgttgccccggcatgcacgacttcagaatatgacgtac
tcatccaagatcagagtcgatgctcgtcttgaggtttttacagaaaatcttgctagcagt
gacaagttcaagactggtgtacaacaacaagttgaaaaaacggtgctaagtgtgcatcag
agtgacattctatttggcagcctcccggtaatggtgaaatcagatttgtgcaatgagaaa
ggaactgagaaaatggattgtgaatttgaccatggaggatattttattatcaagggtgct
gagaagacgttcattgcacaggagcaaatgtgtctaaaaagactgtggatagcaaaagat
ccaaattggtcaattgcatatcgctcagttgccaaacgaaaaaaagttcacgtgaagtta
gttccaaaagtggagcacatcagtggaggagagaagatcctttcagtttactttatggca
actgaagttccaatctggattctgttctttgccttggatgtttcaaatgacctagaggtt
gtaaagttgatagatctggacattgaagactgcagggttgcaaatgtacttgttgcatca
attcatgttgctgataaaaattatgagggtttccgtaaggcagacaatgcagtaaatcac
atcaagaaactcatgcagggttgcaaattcccacctacagagtccgtggaagaatgcttt
aaaaattatttcttccctaacctcaaaagcttggggcagaaggctcggtttctggcatac
atggtaaagtgtctgttagaagcttacatgggacttcacaaagttgacagcagggatgat
ttcaggaacaagaggttggagttggctaacgagctacttgagagagaattgagagttcac
ataaaacatgctgagaggcgcatggtgaaagccatgcaaagggatctttacggagatcgg
gagatacagtcaattgaacactatttggatacttcaataatcacgaatggtctttccaga
gctttttctactggagcttggtcacatccttacaagaagatggagagaatttccggtgtt
gtggctactctaagacgaacaaatcctttgcaagcaacttgtgatatgaggaaaacacgt
cagcaggtttcatacacagggagggctggtgatgctagatacccccacccatctcactgg
ggtaagatttgcttcctttccacacctgatggagaaaattgtggactagttaagaatctg
gcaagcttgggtcttgtcagcactaatgtattggaaaaggatggtcttcttcgaaaatta
cgccagtgtggaatggaaaatttggttgatgatacttcaacttcgctcaaagggaagcaa
aaggttttgttagatggagattggattggagtggttgaaaattcggcgtcatttgttgtt
aagctaagacgtaaacgtcgcaggatggaagtgcctcatcaggttgaaattaagagagat
gagcatcattgtgaagtgcgcatatttgctgattctggaaggatactccggcctctttta
gttgttcgaaatctaaagaagattaaagaagtaaaaggagattatacatttcaaactcta
ttagataatggaataatagaactagtaggaccagaagaagaggaagattgccagactgca
tggggaattagataccttttcaccactgaaaaatctaggctacctgtgaaatatacacac
tgtgagttagattgctcttttttattaggactaagttgcgggatgatccccttcacgaac
catgaccacgcgaaaagagttctctaccagtctgagaagcactctcagcaagcaattgga
ttttctacgacaaatccgaatgccagagttgatactaattctcatcagctgtattacccc
cagaggccacttttccggacgatgctttctgattgtctcggaaaatcatcatattctcat
cagcaaagggggatgatcccacaccccgagttctctaatggccagtgcgcgatcgtgtct
gttaatgtccatctgggatacaaccaggaggactcgattgtgatgaatcggtcatccctg
gagcgtggaatgtttcgatctgaacatattagaagctacaagacagaggttgagagttcc
gaaggattagggaaaaagcttaagcctgaggattatataagctttgggaaaacacagagc
aaaattggacgggtagacagccttgacgatgatggccttcccttcattggtgccaacctc
caaacaggcgacatagtcataggaaagcattctgaatctggggttgatcacagtattaag
ctgcgacacactgaaagagggatggttcacaaagtcgtgctttctgctaatgatgatgga
aagaactttgccgttgtatctctaggacaggttcgttctccatgtcttggtgacaagttc
tcgagtatgcatggacagaagggtgttcttgggtttctggagtcgcaagaaaacttccct
tttacgaaacaaggaatagtcccagacattgtgataaatcctcacgcatttccctcccga
caaactcctggtcaacttttagagtccgccttgggcaaggggattgccctggggggtgca
ctaaaacatgccaccccattttcaacaccatcagttgaagatattacagctcaacttcat
aggcttggattttcaagatgggggcatgaaagagtttatgatggtcggactggagaagca
gttcgttccctgatttttatgggcccaactttctaccagcgcctcactcacatggccgaa
gataaagtgaaatttaggaatacagggccagtccatccacttacccgccagccagttgcg
gataggaagcgatttggtgggatcaaattcggtgagatggaacgcgactgtctattagct
catggtgcagctgcaaatttacacgagcgcctcttcaccctgagtgattcctctcagatc
cacatctgccgcagctgtaagaacgtggccaacgtaattcagcgcccagtttttggtggc
cggaagattcgtggtccctattgtcggttctgtgagtcggtggaagatgtagtgagggtc
aacgtcccatatggagcaaagcttctctgtcaggagctgttcagcatgggaatctctctc
aagtttgataccgagttgtgctga

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