Primulina tabacum: 142519781
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Entry
142519781 CDS
T11246
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
ptab Primulina tabacum
Pathway
ptab03030
DNA replication
ptab03410
Base excision repair
ptab03420
Nucleotide excision repair
ptab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142519781
03410 Base excision repair
142519781
03420 Nucleotide excision repair
142519781
03430 Mismatch repair
142519781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptab03032
]
142519781
03036 Chromosome and associated proteins [BR:
ptab03036
]
142519781
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142519781
DNA replication proteins [BR:
ptab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
142519781
DNA Replication Termination Factors
ELG1-RFC complex
142519781
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
142519781
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
142519781
Check point factors
HRAD17(Rad24)-RFC complex
142519781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
AAA_lid_RFC1
Trigger_C
COMPASS-Shg1
EnY2
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
142519781
NCBI-ProteinID:
XP_075478924
LinkDB
All DBs
Position
11:complement(34355224..34357992)
Genome browser
AA seq
331 aa
AA seq
DB search
MHFTCTAQASRCTKGEAVSSILVNLKVSPQHIEVNLSELKGYEKHVIAELIQEKNQKLPI
TTLQHGRENCKAIIINDADKLSTDASSYIKWMLEKFKGCNKVFFCCRDSAKLYPLKPNCT
LVQLLEPSNEEILAVLAFIAKQEGIQLPQKLANQMAKNSKNNLRQAIRSFEATCQFNRSS
SLKEDQDIKTGWEDKIADIAQNVIEEQSPKQLYNIRGELQNLIEHNVDPEYLFQNIVEEL
KKNLPDQLEEQFDNLYNDYQKNQAVKKYLTPQNLQEVEGKRHNDPRKNVQQFMRIEGIKE
TITLIVIDENQRGGGEEGTVKRKLELDCPLT
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcattttacatgcactgcacaagcatctcgttgtacaaagggagaagcagtgagcagt
atcctcgttaatttaaaggtatcacctcaacatattgaagtcaacctttctgagcttaaa
ggttatgaaaagcatgtcattgctgaacttatccaagaaaaaaaccagaagctgcctatc
acaactttgcaacacggtcgtgagaactgtaaagcaataattataaatgacgcagacaag
ttatctactgatgcctcgtcatatatcaagtggatgttagagaagttcaaaggatgcaac
aaggtattcttttgctgccgagattctgcaaagctctatcccctaaagccaaactgcaca
ttggttcaactcctcgaaccttctaatgaagagattcttgcagttctggcatttatagcg
aaacaagaagggatacagttacctcaaaagttagcgaaccagatggctaaaaattccaag
aacaacctaagacaagctatacgctcatttgaagctacttgtcaattcaatcgcagttct
tccttgaaggaagatcaagatattaaaactggttgggaagataaaatcgctgatattgct
caaaatgttatagaagagcaaagtccaaagcagctctataatatccgaggagaacttcaa
aatctgatagagcataacgtagatcctgagtacttgttccaaaatatagtggaagaactt
aaaaagaatcttcctgatcagttagaggaacaatttgacaatctatacaatgattatcag
aaaaatcaagctgttaaaaagtacctgaccccacaaaaccttcaagaagtggaaggtaag
aggcataatgatccaagaaagaatgtccaacagttcatgagaattgaaggaataaaggaa
accatcactttgatcgtgatagatgaaaatcagaggggtgggggggaagaaggaactgta
aaaagaaaattagaactcgattgccctttgacgtag
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