Primulina tabacum: 142520056
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Entry
142520056 CDS
T11246
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142520056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142520056
03110 Chaperones and folding catalysts [BR:
ptab03110
]
142520056
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142520056
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142520056
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
142520056
Messenger RNA biogenesis [BR:
ptab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
142520056
Chaperones and folding catalysts [BR:
ptab03110
]
Heat shock proteins
HSP60 / Chaperonin
142520056
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
142520056
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
142520056
Exosomal proteins of other body fluids (saliva and urine)
142520056
Exosomal proteins of breast cancer cells
142520056
Exosomal proteins of colorectal cancer cells
142520056
Exosomal proteins of bladder cancer cells
142520056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
142520056
NCBI-ProteinID:
XP_075479129
LinkDB
All DBs
Position
12:complement(38952148..38961955)
Genome browser
AA seq
576 aa
AA seq
DB search
MYRATAAIASSFRSSTSRNLVKVCSRVVSSRNYVAKDINFGTGARAAMLAGVDELAEAVK
VTMGPKGCNVIIQKSRRNPQVTKDGVTVAKSINFLDKAKNVGADLVKQVAEATNKVAGDG
TTCATVLTQAIFKEGCKSVAAGVNVMDLRKGINMAVDAVIADLRSRALMISTPEETTQVA
TISANGESEIGEMIAQAMEKVGKEGVITVADGNTMDNELEVVEGMKLARGYISPYFVTDE
KTKKCELENPLILIHEKKISDMEALVRVLELTVKRNRPLLIVAEDVESESLTMLVLNKHH
GGLKVCAIKSPGFGDNRRANLEDLAILTGGEIISEEYGTSLNKVQIDMLGSAKKVTVSVD
DTLILHGGGDKKLIEERCEQLRTAFETSTAVFDKEKAQERLSKLSGGVAVFKVGGGSEAE
VGERKDRVTDALNATRAAVEEGIVPGGGIALLYATRVLKDLKIANEDQRRGVEIIENALK
APTSTIASNAGVDGALVVGKLLEQDDLNLGYDAASGEYVNMVKAGIIDPVKVIRTALLDA
ASVSILLTTTEAAVVDSKCEKNPLRNRMPNMDDMGY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtacagagccaccgctgcaattgcttcgtcattcaggtcatctacctccaggaactta
gtcaaggtatgtagtagagttgtttctagcagaaattatgttgccaaggacattaacttt
gggaccggagctcgggcagctatgctagctggagttgatgagctcgccgaagcagtaaaa
gtgaccatgggtccaaagggctgcaacgtaattattcagaaaagtagaaggaacccccag
gtgacgaaggatggtgttactgtagccaaaagcataaattttttggataaggcaaaaaat
gtcggcgcggatcttgtgaagcaggtagcggaggcaacaaataaggttgctggtgatggt
accacttgtgctactgtgctcactcaggcaatattcaaagaaggatgcaaatcagtggct
gccggtgtaaatgtgatggacctgcgcaaaggtatcaatatggctgttgatgctgttatt
gcagatttgaggagcagagcactcatgattagcacccccgaagaaactacacaggtggcc
actatctctgcaaatggtgaaagtgaaattggtgaaatgatagcacaggctatggagaaa
gttgggaaggaaggagtcattacagttgcggatggtaataccatggataatgagttggaa
gtggtggaagggatgaagctagcccgtggttatatctctccttattttgttactgatgaa
aaaaccaaaaaatgtgaacttgaaaatcctttaatcctaatccatgagaagaaaatttcg
gacatggaagcacttgttagagtattggaactgaccgtgaagagaaaccgaccactatta
attgttgcagaagatgtggaaagcgagtcacttactatgcttgtcctcaacaagcatcat
ggaggtttgaaggtttgtgctatcaaatctcctggttttggagataacagaagagcaaat
ttagaagatcttgccattctcacaggaggagagattataagtgaagaatatggaactagt
ctgaacaaagttcagattgatatgcttggttccgctaaaaaggtaacagtttcagttgat
gacactttaattctacatggaggaggggataagaaactgattgaagaaaggtgcgagcag
ttaagaactgcttttgagaccagtactgcagtgtttgacaaggagaaagcacaagaaagg
ctgtcaaaattgtctggaggtgttgcagttttcaaggttggagggggtagtgaagcagaa
gttggagaaaggaaggatagggtgacagatgctcttaatgcaacaagggctgctgtggag
gagggcattgttcctgggggtggcattgctcttttgtatgccactagagttcttaaggac
cttaaaattgcgaatgaggaccaaagaagaggcgtggaaataattgagaacgctctaaag
gcacctacttctactatagcatcaaatgctggtgttgatggagctcttgttgtaggcaag
ctattggagcaagatgatctgaatttgggctatgatgctgcatcaggtgaatatgttaac
atggtaaaggctggaatcatagatcctgtgaaagttattagaacagctttgttagatgct
gcaagtgtctccattctattgactaccaccgaggcagccgtcgtggactctaaatgtgag
aaaaatccccttagaaatcgcatgccgaacatggatgacatggggtattaa
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