Primulina tabacum: 142520568
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Entry
142520568 CDS
T11246
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ptab Primulina tabacum
Pathway
ptab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142520568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142520568
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
Pre-60S particles
RNases
142520568
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
142520568
NCBI-ProteinID:
XP_075479718
LinkDB
All DBs
Position
12:complement(1928739..1935285)
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AA seq
568 aa
AA seq
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MSSTNEEPETNEEENANTSTDAKAFFDVYGPEARADVVFKHPEANTTLNLLDVQGLVNWV
LAEGFMPSWVFIKNKPLISKVVMLYVPGLDAALFLSQSKILKSFKQNCGIPRAVLALSCV
SDGMQTIDALLTCKVKRKREEAEVVRKKVAQTSNQAGTCSLLDNLSPADLTKNLPFPLTY
YTLTVKQLEDNGYCSKNPEFPPTLPAPSGTPPHKILALDCEMCITCEGFELTRVTLVDVA
GQVLLDKFVKPANAITDYNTRYSGITPETLSNVTTMLKDVQEEFLQLVRKETILVGHSLE
NDLLALKIRHDLVIDTAILYGHPRGRSYKPALRVLARRFLSKEIQDSTKGHDSVEDARSA
LELALLKIKHGPGFGLASTFLKKKLLTVLSESGKTSSLIDSVSIVKRYASEASHSIPVTS
DDEALLKAKKEIKNNKVHFIWTQFTELFSYFKKQAEDDKHLNTKLAEMISLVTCSKSTSQ
KSIMYEVTSELKDILSRINNRVSSLYASLPCNTMLVICTGHGDTVMVQKLRKILERRETA
VCREKIVKVLEELQAQAEVGLCFVGIKH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacaaacgaggagcccgaaactaacgaagaagaaaacgccaatacgagtact
gatgcaaaggccttcttcgatgtctatggcccagaggccagagcggacgtcgttttcaag
catcctgaagcaaatacaaccttaaatctacttgatgtccaaggacttgtcaactgggtg
cttgctgaaggcttcatgccatcgtgggtttttattaaaaacaagcccctaatttcaaag
gtggttatgctttatgtgcctggccttgatgctgcattgttcttatctcagtccaaaata
ctaaaaagttttaaacaaaattgtggcattcctagggcagttttagcgctcagctgtgta
tcagatggaatgcagactattgatgctcttcttacatgcaaagtgaaaagaaaaagggag
gaagctgaagttgttcgaaagaaagtagcccaaacatctaatcaagcaggaacttgttct
ctattggacaatttgtctcccgccgacttaacaaaaaatttgccattccctttgacatac
tatactcttacagtaaagcaattggaagataatgggtactgttccaagaatcctgaattt
cctccaactctgcctgctccatccggtaccccaccacataaaattttagcgctagactgt
gagatgtgcattacatgtgagggttttgagctcacaagagtgactctggtggatgttgca
ggacaggtattgttagataaatttgttaaaccagcaaacgctatcactgattacaacaca
aggtacagtggaatcacacctgagactctgagtaatgtgaccacgatgcttaaagatgtc
caggaagaatttcttcaactggttcgcaaagagaccatcctcgttggacattcattagaa
aatgatttgttagcattgaagattcgacatgacttggtgattgatacggctatcttatat
gggcacccacgtggtcgttcttataaaccagctttacgtgtgttagccaggagattcctt
tccaaagaaatacaggattcaaccaaagggcatgatagtgttgaagatgcaagatctgcg
ttggagcttgcattgctaaaaattaagcatgggcctgggttcggtttagcttcaacattt
ttaaagaaaaaactcctgactgtgttgagcgaatctggcaaaacctcatctttgatcgat
agtgtatctatagtgaagcgatatgcctcagaggcatctcactcaattccagtcacttct
gacgatgaagctcttttgaaagccaaaaaagagataaaaaacaacaaggtgcattttatt
tggacccaattcacagaattgttttcttatttcaagaaacaagcggaagatgacaagcac
ctaaacacgaagctagcagagatgatatcattggttacatgtagcaaatccacaagtcag
aaaagcatcatgtacgaagtcacctcagaactgaaagatattcttagtcggattaacaac
cgagtcagcagcttatatgccagtctaccttgcaacactatgctagttatctgtaccggc
catggagataccgtaatggtacaaaaattaaggaagattttggagcgaagggagacagca
gtttgccgagagaagatagtgaaagtgcttgaagagctgcaagcccaagctgaagttggc
ttatgttttgttggtattaaacattaa
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