Primulina tabacum: 142520594
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Entry
142520594 CDS
T11246
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142520594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142520594
Spliceosome [BR:
ptab03041
]
Common components
Common spliceosomal components
SR proteins
142520594
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
142520594
NCBI-ProteinID:
XP_075479754
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All DBs
Position
12:complement(7089800..7093782)
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AA seq
240 aa
AA seq
DB search
MSHFGRSGPPDIRDTYSLLVLNITFRTSADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYQDEAAKAVEKLDGRVVDGREIMVQFAKYGPNAERTNKGRISEPVYRSSGRSRNR
SPRSRDEHLDRDYRRRSRSRSRGRYERVRHHGEDRDRLPRGSRSRSRSYSGSPSYRKDTG
RGRSISPRRGRSPRRSPSPRKSSPSRGESPHNNNTKERSTTPKSVSPRGLQADSRSPSPY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactttggaagatctgggccgccggacatcagagacacctactctctcctggtc
ctcaacatcacttttcggacatctgcggatgatttgtttcctctctttgataagtatggc
aaagtggttgatgtctttatccccagagaccggaggactggagactcgaggggctttgca
tttgtgcggtataagtatcaagatgaggctgcaaaggctgttgaaaagctagatggaaga
gttgttgatgggagagaaataatggttcagtttgctaaatatggccccaatgctgaaaga
actaacaaagggagaatctcagaacctgtttacaggtcaagcgggagatctagaaatcgt
agtcctcgttcaagggatgaacacctggatagggattacaggaggagaagccgtagcagg
agtaggggtagatatgagcgtgtgcgccatcacggtgaggatagggatcgtctgcctcgc
ggtagtaggagccgaagccggagctacagtggcagtcctagttatcgcaaagacactggt
agaggccggagtatttctccacgacgaggtcgcagtcctcggaggagcccatctccacgc
aaatcatctccttcaaggggtgagagtccacacaataacaatacaaaggaaagatcaacc
accccaaagagtgtgtctcctcgtggcctgcaagccgattcccgtagcccatcaccttac
tga
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