Primulina tabacum: 142520610
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Entry
142520610 CDS
T11246
Name
(RefSeq) putative pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142520610
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142520610
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142520610
NCBI-ProteinID:
XP_075479777
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Position
12:34296478..34298955
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AA seq
411 aa
AA seq
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MASVFSSVTFPFLLLFFCGLLPCLIANASYPAVQDPELVVQEVHRSLNESRRKLGFLSCN
TGNPIDDCWRCDSNWEKNRQKLADCSIGFGKNAIGGRDGEIYIVTDPSDDDAVNPKPGTL
RYAVIQEEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIANGPCITIQYVTNIIIH
GINIHDCKQGGNANVRDSTKHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
GSTAITISNNYLTHHNKVMLMGHSDSNTQDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHV
VNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNDRFNKEVTKHEDAPESEWKNWNWRTEGD
LMLNGAFFTTSGAGASSSYAKASSLGARPSSLISSITSSAGAMSCKKGSRC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggttttctcttcagtcaccttcccatttctcctcctcttcttctgtggactt
ctcccgtgtctcattgccaatgcatcctacccggctgtacaagaccctgaattggtagtc
caggaagtgcacaggagtttgaatgaatcgagaaggaaactggggttcttgtcgtgcaac
acaggtaacccgatcgacgactgctggcgttgcgactcgaattgggagaagaaccgtcag
aaactggcagactgtagtatcgggttcggcaaaaacgccatcggcggaagagatggcgag
atttacatcgtgacggatccgagcgacgacgatgctgtcaatccgaaacccggaacgctc
cgctacgccgtcattcaagaagagccgttgtggatcatatttgcccgggacatggtcatc
aaattgaaggaggagctgataatgaactcgttcaagaccatcgacggcaggggagctagc
gtccacattgctaatggcccttgcatcactatacaatacgtgacgaatatcatcattcat
gggatcaatatacatgactgcaagcaaggggggaatgctaatgtgagggactccaccaag
cactatgggtggaggaccatatcggacggtgatggcgtgtcgatcttcggcggtagccac
gtttgggtcgaccattgctcgttgtcgaattgtaacgacgggctgatcgacgccatacac
gggtcgaccgcgattaccatctcgaacaactacttgactcatcacaacaaggtcatgctt
atggggcatagtgattccaacacacaagataagaatatgcaagttactattgcctttaac
cactttggggaaggacttgttcaaagaatgccaagatgtaggcttggatatttccatgtg
gtgaacaatgactacacccattgggagatgtatgcaattggagggagtgcagcccctacc
atcaatagccagggcaatagatttctagcccctaatgacagattcaacaaggaggtgacc
aagcacgaggatgcaccggagagcgaatggaagaattggaattggaggaccgaaggagac
ttaatgttgaacggcgcgttctttacgacttccggtgccggagcatcctcgagctatgcc
aaggcctcgagtttaggcgctaggccttcttccttgataagctccatcacttccagtgcc
ggcgccatgagctgtaaaaagggatcgcggtgttag
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