Primulina tabacum: 142520662
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Entry
142520662 CDS
T11246
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142520662
04121 Ubiquitin system [BR:
ptab04121
]
142520662
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142520662
Membrane trafficking [BR:
ptab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
142520662
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142520662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Zf_IFT144_1st
zf-RING_16
zf-HC5HC2H
zf-RING_Vps41
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
142520662
NCBI-ProteinID:
XP_075479857
LinkDB
All DBs
Position
12:complement(34072904..34076770)
Genome browser
AA seq
378 aa
AA seq
DB search
MSSAGTIGAAVAPLLYFCYQCERQVSITPPPSPDADLVCPICQGGFLEESDTAPPPNPSN
VGPNRFFDDSFPNLPFIFSSASGRGGLETFDDLSALFGDRSPNEFNPYAFLNNYINNLQA
RGANIQLVFETPGGGGPGGGGVDFRLPTNLGDYFMGPGLEQLIQQLAENDPNRYGTPPAS
KSAVEGLPDIKINEEMLVSDSSQCAVCKDSFELNEEAKQMPCKHIYHMDCIVPWLELHNS
CPVCRYELPTDDQDYENRKTGQSNDNGRRNSDGSSNIGLGSGGGSLESIYDDDNANSQTP
RTVERGFRISFPWLFRGFGSPAETSNSGGGGAGSSDGGNTNTNTNTNTNTNTNNSNNGAS
NPNFGGGGRGHANEEDLD
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggcgggaactatcggcgccgccgtcgctccgctgctgtatttctgctaccaa
tgcgaacggcaagtcagcatcacacccccgccgtcgccagatgcggatcttgtttgcccg
atatgtcaaggtggttttttggaggaatcggacaccgcgcctccaccaaaccctagtaac
gttggccctaaccgtttttttgacgacagtttcccgaacttaccctttatcttctcctct
gcttccggccgaggtggattggaaacatttgacgacctgtctgcgcttttcggcgaccga
tcccccaacgaatttaatccatatgcttttctgaataattacatcaataatttacaggcg
aggggggcaaatattcagcttgtgtttgaaacacctggaggaggtggaccaggtggtgga
ggggtcgactttaggcttccgacgaatttgggggattattttatggggcctggtttggag
caattgatacagcagcttgcggagaatgatccaaatcgttatgggacacctcctgcttcg
aaatctgcggtggagggattgccggatataaaaattaacgaggagatgttggtgtcggat
tcatctcaatgtgctgtttgtaaagatagttttgagttgaatgaggaggctaaacagatg
ccttgcaaacatatttaccacatggattgtatagtgccttggcttgagctacataactcc
tgtccggtgtgtcgatatgagttgcctactgatgatcaagattatgaaaaccggaaaact
gggcagtcgaatgataatggtagaaggaacagtgatggtagtagtaatatagggttgggg
tctggtggtggaagtctggagagcatttatgatgacgataacgcaaattcacagacacca
aggacagtggaaagggggtttaggatatcattcccatggctttttagaggatttggttca
ccagcagagacaagcaatagtgggggtggaggagctggaagcagtgacggagggaacacc
aacaccaacaccaacaccaacaccaacaccaacaccaacaatagtaacaatggagcatcc
aatcccaacttcggaggagggggaagaggacacgctaacgaggaggacctcgactga
DBGET
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