KEGG   Primulina tabacum: 142520895
Entry
142520895         CDS       T11246                                 
Name
(RefSeq) uncharacterized protein LOC142520895
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ptab  Primulina tabacum
Pathway
ptab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    142520895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptab03036]
    142520895
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142520895
Chromosome and associated proteins [BR:ptab03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    142520895
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     142520895
SSDB
Motif
Pfam: HhH-GPD DAXX_hist_bd
Other DBs
NCBI-GeneID: 142520895
NCBI-ProteinID: XP_075480170
LinkDB
Position
12:28709357..28721944
AA seq 539 aa
MDDPIPCLLRRRKMKRKRKTIHFPEIYTDHPDPRKDGEHTTEEKSQIVVVSPYFVPKCPK
KEDSGVRVKTKREKTSNITHFSDSYTDDAGPCLFEKKKRERREHLMKEKSDVVVSHDFTP
KCLKEEDPGSGFPVCVKSRREKKRKDEDNTHFSEICTDGPDPSLLENEKKKRMRKNRENP
MTKESEIVVSPYFGTQDSGNGFPLCVKTKGKMKRKVEDTSAKEYTSVGLRKRVALESGFL
DSFSVEHRASAVDKAMHEAWLDDFFSQFAYTGGTKSCDLQCNTSGKNVNKCNLGAEGKMK
LSNAGKGIWDKGRVVSPYFVKEAKADLIKQGQKKECVSVRKVSPYFSSSEQEDVHLGKVK
TEGQKPKRKTSSPSLTKAEKRDEAYRRITQDITWKPPLVKEKLIQHDHASDPWRVLVICM
LLNKTGGLQLKKILSDFFNLCPNAKRATEIPAGDIENVIRTLGLQRKRSVAIQRLSREYL
EESWTHVTDLTGVGKYAADAYAIFCTGKWERVRPCDKELVRYWRYLRAHFSSKGILSDP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggatgaccccattccttgtttacttaggaggaggaaaatgaagcgaaaaagaaaaact
atccattttcctgaaatctatactgatcaccctgacccaaggaaagatggagagcataca
acggaggagaaatcacagattgttgttgtttccccttattttgtcccgaaatgcccgaag
aaggaagattccggagttcgtgttaaaactaagcgagaaaagacgagtaacattacccat
ttttctgattcctataccgatgatgctggcccttgtttatttgagaagaagaagagggaa
aggagagagcacctcatgaaggagaaatcagatgttgtcgtttcccatgattttaccccg
aaatgtctgaaggaagaagatccaggaagtgggtttccagtttgtgttaaatctaggcga
gaaaagaagaggaaggatgaagataatactcatttttctgaaatctgtactgatggcccc
gaccccagcttacttgagaacgagaagaagaaaaggatgaggaaaaatcgagaaaatcca
atgacgaaagaatcagaaattgttgtttcgccttattttggcacacaagattcgggaaat
gggtttccactttgtgttaagactaagggaaagatgaagagaaaagttgaagatactagt
gctaaagaatatactagcgttggactcaggaagagagtggcgctggagtctgggtttctg
gattcattcagtgtcgaacaccgtgcaagtgctgtggacaaagcaatgcatgaggcttgg
ttggatgatttcttttcacagtttgcttatactggtgggaccaaatcttgtgatttgcag
tgtaatacgagcggaaagaatgttaacaagtgtaatttgggtgctgagggtaaaatgaag
ttaagtaatgccggaaagggtatttgggacaagggtcgagtagtttctccttattttgtg
aaggaagctaaggctgatttgattaaacagggacaaaagaaggaatgtgtctctgtaaga
aaagtttctccctatttttccagctccgagcaagaggatgtgcatttgggcaaggtgaaa
accgaaggtcaaaagccaaaaagaaagacatcaagcccttctcttactaaagccgagaag
agagacgaggcatatagaagaataactcaagatatcacttggaagcctccactggtgaaa
gaaaaacttatccaacatgatcatgcctctgatccttggagggttttggtcatatgcatg
cttttgaacaagactggtggcctgcagcttaagaaaattctatccgattttttcaatctc
tgtccaaatgccaagagagctacagagattccagcaggggacatcgaaaatgttataaga
actttaggcttacaaaggaagaggtctgtggcaattcagcgattgtcaagggaatatctg
gaagagagctggactcatgtaactgatctcacgggcgtgggcaaatacgcagctgatgca
tatgcaatattttgtacggggaagtgggaacgtgtgagaccatgcgataaagagctggtt
agatactggagatacctccgtgctcacttttcttcaaagggaattttaagtgatccataa

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