Primulina tabacum: 142521016
Help
Entry
142521016 CDS
T11246
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
ptab Primulina tabacum
Pathway
ptab03082
ATP-dependent chromatin remodeling
ptab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142521016
03083 Polycomb repressive complex
142521016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142521016
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
142521016
Histone modification proteins
HAT complexes
HATB complex
142521016
HDAC complexes
Sin3A-HDAC complex
142521016
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
142521016
PRC2.2
142521016
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
142521016
Heterochromatin formation proteins
Other heterochromatin formation proteins
142521016
Chromatin remodeling factors
NuRD complex
142521016
NuRF complex
142521016
NuRF complex (fruit fly)
142521016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_RFWD3
eIF2A
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
142521016
NCBI-ProteinID:
XP_075480309
LinkDB
All DBs
Position
12:39011981..39018306
Genome browser
AA seq
456 aa
AA seq
DB search
MKDRAAEHSVEERYSQWKSLVPVLYDWLANHNLVWPSLSCRWGPKVEQATYKNRQRLYLS
EQTDGTVPNTLVIANVEIVKTRVAAAEHIAQFNEESRSPFVKKSKTIIHPGEVNRIRELP
QNNKIVATHTDSPDVLIWDVERQPTRQPVLGATASRPDLILTGHRDNAEFALATCPMEPF
VLSGGKDKSVVLWSIHDHISSLAADQGAQKSPGSKGSAVNGKAADGSIVQPRGIFLGHED
TVEDVQFNPSSSQEFCSVGDDSCLILWDARSGSSPIAKVEKAHDADLHCVDWNPNDLNLI
LTGSADNTVRMYDRRSLTSGGVERGVGSPVHIFEGHTAAVLCVQWSPDKASVFGSAAEDG
MLNIWDHGKVGNAGTEKSDYPPGLFFRHAGHRDKVVDFHWNAADPWTIVSVSEDGEKTGG
GGTLQIWRMIDLIYRPEEEVIAELDRFKSHLLSCSS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatagagcagcggagcatagcgtggaggagcgctacagtcaatggaaatctcta
gtgcccgtcctctacgactggctagccaatcacaacctcgtttggccgtctctctcttgc
cgatggggaccgaaggtggaacaagcgacttacaagaaccgtcagcgattatatctttca
gaacagaccgatggcacagttccaaacacccttgtcatagctaacgttgaaatagtgaaa
actagagttgcagcagcagagcatattgcacagttcaacgaagaatcccgttcacctttt
gtaaaaaagagcaagaccatcatacatcctggagaggtgaatcgtatcagggaattgccc
cagaataacaagattgtggccactcacaccgacagtcctgatgttctcatttgggatgta
gaaaggcaacctactcgtcaacctgttttaggtgctacagcatctcgtccagatctgata
ctgactggtcatcgagataatgctgaatttgctctagccacatgtcctatggaacctttt
gtgctctctggaggcaaggacaagtctgtggttttgtggagcatccacgaccacatatca
tcattggcagcagatcagggtgctcaaaagtctcctggatctaagggaagtgctgtcaat
ggtaaagctgctgatggctccattgttcaacctcggggtattttcctagggcacgaggat
accgtagaagatgtacagtttaacccatcaagctcgcaggagttctgcagcgttggtgat
gattcttgccttatactgtgggatgcgagaagtggttcttctcccattgcaaaggttgaa
aaggctcacgatgctgatcttcattgtgtcgattggaatcctaatgatttaaatctgatt
ttgactggttctgctgataatactgttcgaatgtatgatcgtcgaagtcttacctctgga
ggagttgagagaggagttggatctcccgttcacatatttgaaggtcatactgctgctgtt
ctctgtgtccagtggtctccagacaaggcatctgtctttggcagtgctgcagaagatggc
atgttgaatatctgggatcatggaaaggtgggtaatgctggaacagaaaaatcagattat
ccccctggattattctttcgacatgcggggcacagggataaggtggttgacttccattgg
aatgctgcagatccatggacaattgttagcgtgtctgaagatggagaaaagactggaggg
ggaggtacattgcagatatggcgaatgattgacctgatttatcgtccagaagaagaggtc
atcgcggagctggataggttcaaatctcatttgctgtcatgctcctcttga
DBGET
integrated database retrieval system
