KEGG   Primulina tabacum: 142521017
Entry
142521017         CDS       T11246                                 
Name
(RefSeq) uncharacterized protein LOC142521017 isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ptab  Primulina tabacum
Pathway
ptab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    142521017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ptab03036]
    142521017
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142521017
Chromosome and associated proteins [BR:ptab03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    142521017
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     142521017
SSDB
Motif
Pfam: HhH-GPD DAXX_hist_bd
Other DBs
NCBI-GeneID: 142521017
NCBI-ProteinID: XP_075480310
LinkDB
Position
12:28824340..28841233
AA seq 525 aa
MKRKRKTIHFPEIYTDHPDPRKDGEHTTEEKSQIVVVSPYFVPKCPKKEDSGVRVKTKRE
KTSNITHFSDSYTDDAGPCLFEKKKRERREHLMKEKSDVVSHDFTPKCLKEEDPGSGFPV
CVKSKREKKRKDEDNTHFSEICTDGPDPSLLENEKKKRMRKNRENPMTKESEIVVSPYFG
AQDSGNGFPLCVKTKGKMKRKVEDTSAKEYTSVGLRKRVALESGFLDSFSVEHRASAVDK
AMHEAWLDDFFSQFAYTGGTKSCDLQCNTSGKNVNKCNLGAEGKMKLSNAGKGIWDKGRV
VSPYFVKEAKADLIKQGQKKECVSVRKVSPYFSSSEQEDVHLGKVKTEGQKPKRKTSSPS
LTKAEKRDEAYRRITQDITWKPPLLKEKLIQHDHASDPWRVLVICMLLNKTGGLQLKKIL
SDFFNLCPNAKRATEIPAGDIENVIRTLGLQRKRSVAIQRLSREYLEESWTHVTDLTGMG
KYAADAYAIFCTGKWERVRPSDKELVRYWRYLRAHFSSKGILSDP
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgaagcgaaaaagaaaaactatccattttcctgaaatctatactgatcaccctgaccca
aggaaagatggagagcatacaacggaggagaaatcacagattgttgttgtttccccttat
tttgtcccgaaatgcccgaagaaggaagattccggagttcgtgttaaaactaagcgagaa
aagacgagtaacattacccatttttctgattcctataccgatgatgctggcccttgttta
tttgagaagaaaaagagggaaaggagagagcacctgatgaaggagaaatcagatgtcgtt
tcccatgattttaccccgaaatgtctgaaggaagaagatccaggaagtgggtttccagtt
tgtgttaaatctaagcgagaaaagaagagaaaggatgaagataatactcatttttctgaa
atctgtactgatggccccgaccccagcttacttgagaatgagaagaagaaaaggatgagg
aaaaatcgagaaaatccaatgacgaaagaatcagaaattgttgtttcgccttattttggc
gcacaagattcgggaaatgggtttccactttgtgttaagactaagggaaagatgaaaaga
aaagttgaagatactagtgctaaagaatatactagcgttggactcaggaagagagtggcg
ctggagtctgggtttctggattcattcagtgtcgaacaccgtgcaagtgctgtggacaaa
gcaatgcatgaggcttggttggatgatttcttttcacagtttgcttatactggtgggacc
aaatcttgtgatttgcagtgtaatacgagcggaaagaatgttaacaagtgtaatttgggt
gctgagggtaaaatgaagttaagtaatgccggaaagggtatttgggacaagggtcgagta
gtttctccttattttgtgaaggaagctaaggctgatttgattaaacagggacaaaagaag
gaatgtgtctctgtaagaaaagtttctccctatttttccagctccgagcaagaggatgtg
catttgggcaaggtgaaaaccgaaggtcaaaagccaaaaagaaagacatcaagcccttct
cttactaaagccgagaagagagacgaggcatatagaagaataactcaagatatcacttgg
aagcctccactgctgaaagaaaaacttatccaacatgatcatgcctctgatccttggagg
gttttggtcatatgcatgcttttgaacaagactggtggcctgcagcttaagaaaattcta
tccgattttttcaatctctgtccaaatgccaagagagctacagagattccagcaggggac
atcgaaaatgttataagaactttaggcttacaaaggaagaggtctgtggcaattcagcga
ttgtcaagggaatatctggaagagagctggactcatgtaactgatctcacgggcatgggc
aaatacgcagctgatgcatatgcaatattttgtacggggaagtgggaacgtgtgagacca
tccgataaagagctggttagatactggagatacctccgtgctcacttttcttcaaaggga
attttaagtgatccataa

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