KEGG   Primulina tabacum: 142521094
Entry
142521094         CDS       T11246                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
ptab  Primulina tabacum
Pathway
ptab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    142521094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142521094
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     142521094
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     142521094
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 142521094
NCBI-ProteinID: XP_075480400
LinkDB
Position
12:complement(39120900..39123551)
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGIFRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLDKEELPSHMTCVSPAEIRRAKKAERESSELKGMMKQ
RMDFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggcccggaagatatttacctctccacatctcttgccagctatcttgac
aagaaacttcttgtattacttcgagatgggaggaaactattagggatttttcgttccttc
gatcaatttgctaatgcagttttggaaggcgcatgtgagcgtgttattgttggcgatctg
tattgtgacattccattaggtctgtatgtgattcgtggagaaaatgttgtgttaattggg
gagctggacctggacaaagaggaacttccttcacacatgacttgtgtttcacctgcagag
ataagaagggcaaagaaagcagaaagggagtcttcagagctcaaggggatgatgaaacaa
aggatggattttcttgatatggattga

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