Primulina tabacum: 142521765
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Entry
142521765 CDS
T11246
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ptab Primulina tabacum
Pathway
ptab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142521765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142521765
Membrane trafficking [BR:
ptab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
142521765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
142521765
NCBI-ProteinID:
XP_075481071
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All DBs
Position
13:36932309..36941924
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AA seq
790 aa
AA seq
DB search
MMISDGVEDEEKWLTAGIAGIQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHK
YYELYMRAFDELRKLEIFFKEETSRGCSMVELYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGIQNPVRGLFLRSYLSQVSKDKLPDIGSEYEGDSDTVIDAVEFV
LQNFTEMNKLWVRMQYQGPTREREKREKERSELRDLVGKNLHVLGQIEGVDLEMYKEIVL
PRVLEQVVNCKDELAQYYLMDCIIQVFPDVYHLQTLETLLNACPQLQSSVDVKTVLARLM
ERLSNYAASDVEVLPELFQVEAFAKLNNAIDKVIAAQDNMPIVGVVTLYASLLTFTLQVH
PDRLDYVDQILGACVKKLSGKERLDDSKATKLIISLLSAPLEKYKDIDTVLKLLNYPLVI
EFLHGQTNKEMANVIVQNIMKNRTCISTAEKADALFELIKGLIRDLNDFHDELDEEDFKE
EQSFVARLIQMMHSDDPEEMLKIICIVKKHILTGGAKRLPFTIPPLIFSTLKLIRRLESQ
DDSVSKEDDSAMPKKLFQIVTQTIEALSSIPVPELALGLYLQCAEAANDSDLEPVAYEFF
TQAYILYEEEITDSKAQVTTIHLIIGTLQRMHVFGVENRDALTHKATGYSAKLLKKPDQC
RAVYACSHLFWLDENDRIRDGERVLLCLKRAQRIANAAQQMSSATRGSSGSVLLYIEILN
KYLYFYEKGISQITADLIQGLIELITSTTGGENTTLDPAADAFFASTLRYIQFQKNKGGA
VAEKYEHINV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttcagacggagttgaagatgaagaaaagtggctgactgctgggatcgccggc
attcagcagaatgctttctacatgcatcgcgctcttgattctaacaatttgaaggatgct
ctcaagtattcagctcagatgctgtccgagcttcgcacttctaggctttcccctcacaag
tactatgagctttatatgagggcatttgatgaattgaggaaactagagatcttcttcaag
gaggagactagtcgtggctgctcaatggttgagctgtatgagctcgtccagcacgctggc
aacattttgcctagactgtacttgctctgtactgtgggttctgtttacataaaatccaaa
gaagctcctgccaaggatattctcaaagatcttgtagaaatgtgccgcggcatccagaac
cctgttcgtgggctctttcttaggagttatctctctcaagtcagtaaagacaaattgcct
gatattggttctgaatatgaaggagattccgatacagttattgatgccgtcgaatttgtt
ctccaaaatttcacggaaatgaacaaactttgggtccgaatgcaatatcagggaccaact
cgggaaagggagaagcgggaaaaagaaaggagtgagcttcgtgatcttgttggtaaaaac
ctccatgttctcgggcagatcgagggtgttgaccttgaaatgtataaagaaattgtgctt
cccagagttttagaacaagttgtcaactgcaaagatgagcttgcccaatactacttgatg
gattgcataattcaagtctttcccgacgtttaccatctgcagacccttgaaacactattg
aatgcttgccctcagcttcagtcctctgttgatgtaaaaacagttcttgctcggctaatg
gaaagactttcaaattatgctgcttctgatgttgaagtattaccggaactttttcaagta
gaagcgtttgccaagttgaacaatgctatagacaaggtgatagcagcacaagataatatg
cctattgttggagtagtaactttgtatgcgtctctattgacatttactcttcaagtacat
cctgatcggcttgattatgttgaccaaattcttggagcatgcgtaaagaaactttcagga
aaagaaaggcttgatgacagcaaagcgacaaaactgatcatttctcttctaagtgctcca
cttgagaaatataaagatatcgatactgtgttgaagctgttaaattatcctcttgtcata
gaatttctacatggtcaaacaaataaggagatggcaaatgtaattgttcaaaacataatg
aaaaacaggacttgcatttcaactgccgagaaggcagatgcattgtttgaattgattaag
gggctcatcagagacttgaacgattttcatgatgagcttgatgaggaggatttcaaagag
gagcagagttttgttgcacgtcttatccaaatgatgcacagtgatgatccagaagagatg
ttgaagatcatctgtattgtgaagaaacatattttgacaggaggagcaaagagactgcca
tttaccatccctccgcttatatttagtaccttaaagttgataaggcgactggaaagtcaa
gatgatagtgtatccaaggaagatgactcagctatgccaaaaaaattatttcagatagtg
acgcagacgattgaagctttgtccagcattccagttcctgaactggctctagggctgtat
ctgcagtgtgctgaggctgcaaatgactctgatttagaacctgttgcatatgaatttttc
actcaagcttatattttatatgaagaagaaatcacggattcgaaagctcaagtaaccacc
atacacctaattatagggacacttcaaagaatgcatgtctttggcgttgagaacagggat
gcattaacacacaaggccacagggtattctgctaagctgttgaagaagcctgatcaatgc
agagctgtctatgcatgttcccaccttttttggcttgatgaaaatgacagaatccgggat
ggagagagggtcttgctttgcttgaaacgtgctcagagaattgcaaatgctgcgcaacaa
atgtccagtgcaactcgagggagcagcggatcagttttactctatatagaaatattaaac
aagtatctctacttctacgagaaggggatctcacagattactgctgatttaattcagggc
ttgattgaattgatcacaagtacaacaggtggtgaaaacacgacacttgatccagcagca
gatgctttttttgccagtacgctaaggtacattcaatttcagaagaacaaaggcggtgca
gtggcagagaaatacgagcatatcaatgtctaa
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