Primulina tabacum: 142522130
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Entry
142522130 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: translation initiation factor IF-2, chloroplastic-like
KO
K02519
translation initiation factor IF-2
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ptab03012
]
142522130
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142522130
Translation factors [BR:
ptab03012
]
Eukaryotic type
Initiation factors
MTIFs
142522130
Prokaryotic type
142522130
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
142522130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
Ras
RsgA_GTPase
Roc
IF2_N
Arf
Motif
Other DBs
NCBI-GeneID:
142522130
NCBI-ProteinID:
XP_075481395
LinkDB
All DBs
Position
13:complement(35976801..35983873)
Genome browser
AA seq
1007 aa
AA seq
DB search
MASLASLANLGSVKMNSFGNFDGSVCLVRRVSFHRNLCSCRRFWIGKRWRYAGVCRFSLT
TNYVAKQRTSVSLDSTYGVGKYNDNETFLRAASRPVLKSGSGIEPLQSMSWGEPRLREGL
GDKNVNDDERSKMIESLGEVLEKAEKLETGKKVYVPRNNQSKNEISKQNNGRLVVEMENL
DIKYKTVKSVWRKGNPVTNVPKVVKGPPKQEPKIGGGEVTGSQSVSPPRVPQPRQKVQPR
LQAKPSVAPPPFLKKPVVSKDVNAAAKSPVSDESDTGTKMKERKPILIDKFASKKPVVDP
VIAQAVLAPPKPGKSPVPRKFKAEFRKKSGTSEGPRRRRVDDDNGILDEDASELNVSIPG
AATLRKGRKWSKASRKAARLRAAHDAAPVKVEMMEVGEDGMLIEELACILVISEGEIFGY
FYSKGIKPDGVQKLSKDMVKMVCREYQVEVIDAIPVRVEEMAKKKEIFDENDIDKLKDRP
PVLTIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPIDGKPQTCVFLDTPG
HKAFGAMRARGARVTDIAIIVVAADDGLRPQTSEAVAHAKAAGVPIVVAINKIDKDGANP
DRVLQELSSIGLMPEEWGGDVPMVKISALKGENINDLLETVMLVAELQDLKANPDRSAKG
TVIEAGLDKSKGPVATFIVQNGTLRRGNTIVCGEAFGKVRAIFDDQGTKVDEAGPSIPVQ
VLGLSNVPLAGDEFEVVASLDIAREKAGLRAEYLRNERITEKAGDGKVTLSSLASAVSAG
KNAGLDLHQLNIILKVDVQGSIEAVKQALQVLPQENITLKFLLQATGDVSTSDVDLAVAS
NAIIFGFNVKTPGSVKSYTDNRSVEIRLYKVIYELIDDVRNAMEGLLDLVEEQVPMGSAE
IRAVFSSGSGRVAGCMVTEGKLVKDCGIRVLRKGKEVHVGVLGSLRRVKEIVKEVNAGLE
CGIGSDVFDDWEERDIVEAFTTVQKKRTLEEASATMSAALKEVGIQL
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttagcttccctggcgaatttgggaagcgtgaagatgaattcttttggtaat
tttgatggctctgtttgtttagttaggagggtatcctttcacaggaacctttgtagttgt
agaaggttttggattggtaagagatggaggtatgctggtgtttgtagattttctttaact
actaattacgttgcaaaacaacgtacttcagtatctcttgattccacgtacggagttggt
aaatacaatgacaatgagacttttctgagggctgcctctaggccggttttgaaatcggga
tcgggaattgaacccctccagagtatgtcttggggtgagcccagacttcgagaaggttta
ggcgataagaatgtgaatgacgatgagagaagtaagatgatcgagtctctaggggaggtg
ttggagaaagcagaaaagctagagactggcaagaaggtgtatgtgccaaggaataatcag
tctaagaatgaaatatctaagcaaaacaacggcaggctggttgttgagatggaaaattta
gatatcaagtataagactgtgaagagcgtttggaggaagggtaatccagtcactaatgtg
ccaaaagttgtgaagggacctccgaaacaggaacctaaaataggtggaggagaggtgact
ggatctcagtctgtttctccacctagggtcccccagcctcgtcagaaagttcagccaagg
ttacaggcaaaaccctctgtagctcctcctccttttctcaagaaacccgttgtctcaaag
gatgttaatgcagctgccaagtctcctgtttctgatgaatctgatacaggtacgaagatg
aaagagcgtaaaccaattttaatcgacaaatttgcgtctaagaaacctgtggttgatcct
gtgattgctcaagctgttttagcccctccaaagccagggaagagccctgtacctagaaaa
tttaaggccgaatttcgaaaaaaaagtggcacgtcagaaggacctcgaagacgcagggtt
gatgatgacaatggaattcttgatgaggatgcatcagaactcaatgtttcgattcccggg
gctgccactttgagaaaaggaagaaaatggagtaaagcgagccgaaaagctgctagactc
cgagcagcccatgatgctgctcctgttaaagtagaaatgatggaagttggtgaagatggc
atgttgattgaagagttggcctgcatcttggtcatcagtgaaggtgaaatttttgggtat
ttctactccaaaggaattaaacctgatggtgttcagaagctgagcaaagacatggtgaag
atggtatgcagagaatatcaggtggaagtcattgatgctatccctgtgagggtagaagaa
atggcaaaaaaaaaagagatttttgatgaaaatgacatagacaaattaaaagacagacct
cctgttttgaccataatgggccatgttgatcatggaaagacgacacttttggattacata
cggaagagcaaggtggcagcatctgaagctggtgggattactcaaggaattggggcttat
aaggttcaagtacctatagatggcaagccacaaacatgtgtttttcttgatactcctgga
cacaaggcattcggagctatgagagctcgtggagccagagtgacagacattgccatcatt
gtagtggcagctgacgatggactccgacctcaaacaagtgaggctgttgcccatgccaaa
gcggctggggtgccaattgtggtagctataaataagatagataaggatggagctaatcct
gatcgagttctacaagaactttcctccattggtttgatgcctgaagagtggggtggcgac
gttccaatggtcaagataagtgctcttaagggagaaaatataaatgatttactggaaact
gtcatgcttgttgctgagttgcaagacctgaaggctaatccagataggagtgctaaagga
acagtgattgaagcaggtcttgataaatccaagggacctgtggctacctttattgtgcaa
aatgggacactcagaagaggaaatacgatagtttgtggtgaagcgtttggaaaggtgcgg
gcaatatttgatgatcaggggacaaaggttgatgaagctggtccttctattccagtacag
gttcttggattgagcaatgttcctttagctggtgatgagtttgaggttgttgcatctctt
gatattgctcgagaaaaggcagggttgcgagcagagtatttgagaaatgaacgtataaca
gaaaaagctggagatgggaaggtgacgctttcttctttagcatctgctgtttcagctggg
aagaatgctggattagatctgcaccaactcaatataatattgaaggttgatgttcaggga
tccattgaggccgtaaagcaagctttgcaagtgcttcctcaagaaaacatcactctgaag
ttcctgctgcaagctactggggatgtgagcaccagtgatgttgacttggcagtggcaagc
aacgctattatttttggcttcaatgtcaaaacacctggttcagtgaagagttacacagat
aacagaagtgttgaaatccggctatataaagttatatatgaacttattgatgacgtgcgg
aatgcaatggagggtcttctggatctcgttgaggagcaagtaccgatgggttcagcagag
ataagggcagtatttagtagtggcagtggccgtgttgctggatgcatggtgacagaggga
aaactagtgaaagattgtggaattcgtgtactaagaaaaggcaaagaagttcatgtcggt
gtcctaggttccttgagacgggtgaaggagatagtaaaagaggtaaatgctggactcgaa
tgcggtattggaagtgatgtcttcgatgattgggaggagagggatatcgtggaggcattt
accaccgtgcaaaagaaaagaacactcgaagaggcgtctgccacgatgtcagctgcactc
aaagaagtagggatacaactgtga
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