Primulina tabacum: 142522231
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Entry
142522231 CDS
T11246
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1
KO
K14485
transport inhibitor response 1
Organism
ptab Primulina tabacum
Pathway
ptab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142522231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142522231
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142522231
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
142522231
NCBI-ProteinID:
XP_075481559
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Position
13:complement(34033616..34038826)
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AA seq
626 aa
AA seq
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MLASGLSELFLWLFSSSKYYNLLSTRVPIQGAHLRRMDPNPKKPNISTPDSAILNGSTHT
YSSFPDEVLEKVLSLIDSHKDRNSVSLVCKNWYNAERWTRTNLFIGNCYSVSPEIVAKRF
PRIKSVRLKGRPRFSDFNMLPRDWGADVNPWLVMFAKVYPFLEELRLKRMTVSDESLELL
ANSFQGFKVLSLSSCDGFSDDGLNAIATHCTNLTELNIQDNVTEDIGGGWLSCFPDDFVS
LEILNFASLSSEVSFDTLERLVSRCKSLRVLKVNESVNLEQLQRLLALAPQLTELGTGSF
MQELAPPQCEELEISFRNCKDLHALSGLWEVTSPYLPTLYGACAGLTFLNLSDAALQSVE
FSKLLAHCPNLRRLWVVDTVEDKGLEAVGSSCPLLEELRVFPADPYDRHHRHGVTDWGFL
AVSRGCRKLHYVLYFCRRMTNAAVVTIVQNCPDFTHFRLCIMNPGQPDYLTNEPMDEAFA
AVAKTCTKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFAGSSDWGMQCVLEGCPKLRK
LEIRDSPFGNAALLSGLEKYERMRSLWMSACNLTMKGCMLLARKMPRLNVEVIKDEESDD
SQADKVYVYRSIAGPRQDAPPFVLTL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgttagccagtgggttgtctgagctttttctttggctcttcagctcttccaaatattac
aatcttctcagcacccgagtccctattcaaggagcccatttgaggcgcatggatccaaac
cccaagaaacccaatatttcaacaccagattcagctatcttgaatggatcaactcacact
tactcgtcattccctgatgaagtcttggaaaaagttctctcactcatagattcacacaag
gacagaaactcagtctccctcgtctgcaagaattggtataatgcagagagatggacaaga
acaaatctatttataggcaactgctattctgtatctcctgagattgtggctaaaaggttt
ccaagaattaaaagtgttagactaaaaggaagacctagattttctgatttcaatatgtta
cccagagattggggcgctgatgtgaatccttggctggtcatgtttgcaaaagtttaccct
tttttggaggagctaaggttaaagagaatgactgttagtgatgagagcttggagctcttg
gctaattcatttcagggcttcaaggttttatctttgtcaagttgcgatggattcagcgat
gatggactcaatgccattgccactcattgcacgaacttgacggagctcaacatacaggac
aatgtaactgaggacattggtggaggttggctaagctgctttccagatgactttgtctca
ttagaaatactaaattttgctagccttagtagtgaggtaagttttgacacccttgagagg
cttgttagtcgatgcaaatcattaagagttctgaaggtcaatgagagtgttaacttggaa
caattacaacggctccttgcacttgctccccaattaacggaacttggtactggctctttc
atgcaagaacttgcgcctccgcaatgcgaagaacttgagatttcgtttagaaattgtaaa
gatctccatgctctttcgggtttatgggaagtcacctctccctatcttcctactctttat
ggagcgtgtgccggtctgactttcttgaacttaagcgatgctgctcttcaaagtgtcgaa
ttttcaaaacttcttgctcactgccccaatttacgacgcctttgggtagtcgatacggtt
gaagacaaagggcttgaggccgttggatccagctgccccttacttgaagaactccgagtc
ttccctgctgatccttatgacaggcatcatcgccacggggtgacagattggggattcttg
gccgtctctcgtggatgtcgcaaactccactatgtcctttacttttgccgtcggatgact
aatgccgctgttgtgaccatagtccagaactgccccgactttacccatttccgtctttgc
ataatgaatccaggccagccagactaccttacaaatgaacctatggatgaagcatttgca
gctgtggctaaaacttgcactaaacttcagaggctttcggtttcgggccttctgactgat
cttacattcgaatatattgggaagtatgccaaaaatctcgagactctttctgtggctttt
gctggcagcagcgattggggaatgcagtgtgttttagaaggttgtccaaagttaagaaag
ctcgagataagagattccccatttggtaatgctgcacttctatctgggctcgagaaatac
gagaggatgcggtctttgtggatgtctgcctgtaatttaaccatgaaagggtgcatgctg
ctagcaaggaagatgccaagattgaatgttgaagtaatcaaagacgaggaaagtgatgac
agtcaagctgacaaagtttacgtgtatcggtccatagcagggccaagacaagatgctcct
ccttttgttctcactctttga
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