Primulina tabacum: 142522291
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Entry
142522291 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: hyperosmolality-gated Ca2+ permeable channel 1.2-like
KO
K21989
calcium permeable stress-gated cation channel
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptab02000
]
142522291
Transporters [BR:
ptab02000
]
Other transporters
Pores ion channels [TC:
1
]
142522291
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
142522291
NCBI-ProteinID:
XP_075481688
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Position
13:33805026..33812747
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AA seq
738 aa
AA seq
DB search
MATFKDIGIAAGFNILFAVAFLVTFAILRLQPFNDRVYFPKWYLKGLRCSPTNSGVFVSK
FVNLDWKSYIRFLNWVPDALKMPEPELIDHAGLDSAVYLRIYLLGLKIFVPVTLLAWAIL
VPVNWTNHTLAKAGIQDKLEYSDIDKLSISNIPEESHRFWAHVIVAYAFTFWTCYTLSSE
YATIAAMRLHFLSSARRRADQFTVLVRNVPPDANELVTESVEHFFLVNHPDHYLTHQVVI
NANKLAKLVKKKKVKENWLDYYQLKYLRNPSKRPMTKIEEERERVKTDISCIMPAAFVSF
KSRWGAAVCEQTQQSRNPTLWMTEWASEPRDVYWNNLAIPYVSLSIRRLIVSVAFFFLTF
FYMIPVTIAQSFANIETFEKRAPFLRSLIGRGFLKGLMQGLLPGIALKIFLIVLPTILMM
MSKFEGFLSISSLERRSATRYYLFNFINVFLVSVITGSAMEQLNSFIHQSANEVPKKIGS
AIPMKATFFITYVMVDGWAGVAGEILRLKPWIFYHLKNFFLVKTESDREEAMDPGSIGFN
TGEPQIQLYFLLGLVYAAVTPVFLPFILVFFALAYVVYRHQIINVYNQEYESAAAFWPDV
HGRIVFALVFSQIVLMGLMSTKKAALTAPFLIALPVMTLSFHLYCKGRYESAFVKFPLQE
AMMKDIXERAREPNLDLKGYLQTAYIHPVFKNDDDEEEDDPNRKLDESVLVPTKRVSRRN
TPAPSKLSGVSSPEQLDI
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttttaaggatattgggattgctgcaggatttaacattctctttgcagtagct
ttcctggtaacatttgccatcttaaggcttcagccatttaatgaccgcgtctattttccg
aaatggtacctcaagggcttgagatgcagtcccacgaactcaggcgtgtttgtgagcaaa
tttgtgaatcttgactggaaatcatatattaggtttttgaattgggttccagatgcactt
aaaatgccagaacccgagctcattgatcatgctggactggattcggctgtctatttgcga
atttacttgctgggacttaagatttttgtacctgtgacgttacttgcctgggctattttg
gttccagtcaactggaccaaccacaccttggctaaagctggaatacaagacaaactcgag
tacagtgacattgacaagctttctatttcaaacattccggaggaatcacataggttttgg
gctcatgtaattgtagcatacgcctttactttttggacgtgctatactctgtcaagtgag
tatgcaacaattgcggcaatgcgcttacattttctgtcttcagcaagacgtcgtgctgat
caattcacggttcttgtcaggaatgtgccaccagatgcaaatgaattggtgactgaatcc
gtggagcactttttcttggtcaaccatccggatcactatctgactcatcaggttgttatc
aatgcaaataaacttgcaaaactggttaaaaagaagaaagttaaggaaaattggctggac
tattaccaactaaaatatttgagaaacccatcaaaacgtcccatgacaaagatagaagaa
gaacgtgagagggtaaaaactgatatcagctgtatcatgcctgcggcatttgtctcattc
aaaagtcggtggggtgctgctgtttgtgagcaaacacagcaatcgagaaatccaactttg
tggatgacagagtgggcttctgagccacgtgatgtatattggaataacctggcaattcca
tatgtttcactgtctattaggaggcttattgtttcagttgctttcttcttccttacattc
ttctacatgatccctgttactattgcccaatctttcgccaatatagagacgtttgaaaaa
agggcaccattcttgagatcactcattggtagaggttttctcaagggtttaatgcaagga
ttattgcctgggattgctttaaagattttcctcattgtgcttccaacaattctgatgatg
atgtccaaattcgagggctttctgtccatatcgtctttggagaggagatccgccacgaga
tattatctcttcaactttataaatgttttccttgtaagtgtaataacaggaagtgcaatg
gagcaactcaatagttttattcatcagtctgcaaatgaggttccgaagaaaataggttct
gcaatccctatgaaagcgactttcttcataacttacgtaatggttgatggatgggctggt
gtagctggagaaattttgagattgaaaccgtggatattctaccatctaaaaaacttcttc
ttggtgaaaactgagagtgatcgagaagaagctatggatccaggaagcatcggtttcaat
acgggtgaaccacagatacagttatattttcttcttggccttgtctatgctgcggtgaca
ccagttttccttccgtttatattggttttctttgccctggcctatgttgtatatcgtcat
cagatcatcaatgtgtacaaccaagaatatgaaagtgctgcagcattttggccagacgtc
catggccgtatagtttttgctctcgtcttctcccagatagttctaatgggattaatgagc
accaaaaaggccgctctaactgcccctttcctcatcgcgctccccgttatgaccctctca
ttccacttgtactgcaaaggaagatacgaatcagcttttgttaaatttcctttacaggag
gcaatgatgaaagatattnnggaacgtgccagagaaccaaacctggacttgaaaggctat
ctccaaaccgcttatatccatccagtcttcaagaatgatgatgatgaagaagaggacgat
ccgaataggaagttggatgaaagtgtgctcgtacctacgaaaagagtctctcgtagaaat
acaccagctcccagcaaactaagcggggtgtcctcacctgaacaacttgacatctag
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