Primulina tabacum: 142522349
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Entry
142522349 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142522349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142522349
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142522349
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
142522349
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
142522349
NCBI-ProteinID:
XP_075481791
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All DBs
Position
13:37706101..37709513
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AA seq
354 aa
AA seq
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MARFSASGDEDERDERRHASKKPRTSTADSGESPFRFPCSRRRVPIDFYEESEMESDRLS
PVEEPDEDEEGEEEEYDYEEEVEEEEEEEEVQDQQSGDAPAHVTVTLTDPDVLDCPICFE
PLSPPVYQCENGHISCPSCCIKMKNKCGTCSRPIGYSRCRAIEKVLESVKIACINKQHGC
GETINYSKKHDHEKTCIYAPCDCPYLSCTHVSISNSLYTHFATVHSHACKKFLFNTVFSI
TVQTSQQYLFLQEKXENILFVLDHTNDYLGSLMSVVCVAPTSSKRSFLYDISAKDGMSLI
RVKTVAENMPKCVVQPRAKKLFLMPKDFIASIRLIKIELMIQSLANYPQGEVVY
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggttttctgcttctggcgatgaagatgagcgagacgagcggaggcacgcatcc
aagaaacctcggacctccactgccgattccggtgaaagcccatttcgttttccctgctct
cgacgacgagtaccgatagatttctacgaggaaagcgagatggagtcggatcgtttgtcg
ccggtagaagaaccagatgaagatgaagaaggagaggaggaggaatatgattatgaggaa
gaagtagaagaagaagaagaagaagaagaagtgcaagatcaacagagcggagatgctccg
gcgcatgttaccgtaaccctaacggacccggatgtactggattgccccatctgttttgag
cctctcagccctccggtttatcagtgtgagaatgggcatatatcatgtccatcgtgctgc
atcaagatgaagaacaaatgtggaacttgtagcaggccaattgggtacagccggtgcagg
gccatagaaaaggttcttgaatcggtcaaaattgcatgtataaacaagcagcacgggtgt
ggggagacaataaattacagtaagaagcatgatcatgagaaaacatgcatttacgccccg
tgtgattgcccttatctttcatgtacccacgttagcatatccaatagcctgtatacgcac
tttgcgactgtgcattcacatgcttgcaagaaatttttattcaacacagtatttagcatc
acagtgcagaccagtcagcagtatcttttccttcaggaaaaanatgagaatatacttttt
gtccttgatcatacgaatgattatcttggaagtttaatgagtgtagtctgtgttgcgcca
acatcatcaaagaggtcattcttgtacgatatttctgcaaaagatggaatgagcttgatc
agagtaaaaactgttgcagagaacatgccgaaatgtgttgtgcagcctcgtgcaaaaaag
ttgttcctgatgccaaaggatttcattgcctcaatccgactgatcaagatagaacttatg
atacagagtcttgcaaactatcctcaaggagaggtggtatattaa
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