Primulina tabacum: 142522555
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Entry
142522555 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC142522555
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142522555
03015 mRNA surveillance pathway
142522555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142522555
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142522555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
142522555
NCBI-ProteinID:
XP_075482119
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All DBs
Position
13:33208932..33213922
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AA seq
441 aa
AA seq
DB search
MVMAKAARGRPRSRSRSRSGSSSRSRSRSGSYSGSGSRSSSRSRSRSKSFSSSSSRSRSG
SSRSRSPAPPRKSPAEGAKRGRSPPPPPTKKTSPPPRKASPIPESLVLHVDQLSRNVNEN
HLKEIFGNFGEVVNVRLAIDHVVNLPKGFAYIEFKIRGDAEKAQLHMDGAQIDGKVVRAK
FTLPERKKPSSPPKAAATTSRRDAPKPDAAADADKDGPKRRRESSPRRKPHSPPRRSPVA
RRASPIARRGSPRREPDSPPPLPLPPPPPPPRRRADSPGRRRADSPFRRGNSPPPRRRPT
SPVRGRSPNSPPRRLRSPPRGSPRRVRGSPVRRRSPLPPRRRSPRHARSPPRRSPVVRRR
SRSPIRRPAHSRSRSLSPRRGRGPPARRGRSKSYSSSPSPRRAQRRVSRSRSPKRAIRGR
SGSSTTSSSSSPPPPPPPRKP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggcgaaagccgcccgtggccgcccccgctcgcgctcccgttcaaggtcaggc
tcttcctcccgctcgcgctcccgttcaggctcttactccggctcaggctcacgctccagt
tcgaggtcgcgctcccgctctaaatctttctcctcgtcttcctctcgttcccgcagcggc
agttctcgtagccgtagccctgctcctccccggaagagtcctgcagaaggagcaaaacga
ggccgttcaccaccgccaccacctactaagaaaacttccccacctcctaggaaggcttct
ccaattccagaatctcttgttctacatgtcgaccagcttagtaggaatgtgaatgaaaac
catttgaaagaaatatttggtaactttggtgaagttgtgaatgtgcgactggcaatcgat
catgttgttaaccttccgaagggatttgcatacattgagttcaagattcggggggacgcc
gaaaaagcacaattacacatggatggtgcccaaattgatggcaaagttgttcgagccaaa
tttacattaccagaacgaaagaagccatcctcacctcctaaagctgctgctaccacatcg
aggagagatgctccaaaacctgatgctgctgcagatgctgacaaagatggaccaaagagg
cggagagaatcatctccccgccggaaaccccattctcctcctcgaagatctcctgtggca
cgaagagcttctcctattgcacgaagaggttctcccagaagggagccagattctcctcct
cctcttcctcttcctcctcctcctccccctccccgtagacgtgctgactctccaggtcgt
cgtcgagctgattctccctttagaagaggtaattcaccacctcctaggagaaggcctaca
tcccctgtcagaggccgttcacccaattcaccaccaaggcgtcttagatcacctcctaga
ggttctccgcgacgggtgcgtggaagtcctgttcgacgccgttctccacttcctcctagg
cgccgatctccaaggcacgctcgaagtcctcctagaaggtctccagttgtccgccgacgt
agtcgttcacctataaggaggccagctcattcgcgatcaagatccttgtctcctagaaga
ggtcgtggaccaccggccagacgtggtagatcgaaatcatattcttcatctcctagccca
cgccgggcgcaacgaagggtttcaaggagccgcagccctaaaagggcaataagaggaaga
agtggcagcagcaccaccagcagcagcagttctccaccacctcctcctcctcctcgtaag
ccttaa
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