Primulina tabacum: 142522752
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Entry
142522752 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: putative cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ptab Primulina tabacum
Pathway
ptab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142522752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptab04040
]
142522752
Ion channels [BR:
ptab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142522752
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GFIT
Motif
Pfam:
Ion_trans
DUF6525
Motif
Other DBs
NCBI-GeneID:
142522752
NCBI-ProteinID:
XP_075482396
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Position
13:complement(30942241..30947949)
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AA seq
775 aa
AA seq
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MDPLEKEEIPMLSATYFHVDDNSSSTGRQFSTRTRSASMSLPMNSFDTSENVNNIMGFTG
PLRKERRNSFIQRSGPLYVNRNHEAVFEPPQSVLQQKNTEPKIERYSSSINGTYNNQWPS
DNYVDKNEHLLKSGQLGMCNDPYCTTCPTYYHLKGRQKQSRTSELYDAKFHNMFYGDAKG
WAKKTCSVLLHYIPGIMNPHSKFVQRWNKFFVISCLFAVFVDPLFFFLLSVLQGNKCIVL
NWPMTTTVVVLRSLTDFIYLIHIFIQFRLAYVAPESRVMGAGELVDDPKKIAQNYLFGYF
TIDFFVVLPLPQIIILLILPDSVGSSGANYAKNLLRGAILVQYVPRLYRFSPLLAGQSPT
GFVFESAWANFVINLLIYMLASHVVGSSWYLLGLQRVNQCLRDACRSTNMTRCMEFIDCG
HGNDYGDFRSDSTWELWKSNANSTACFGQGSFDYGIYQNAVDLTTEQSVITRYVYSSFWG
FQQISTLAGNQVPSYFVWEVVFTMSIIGVGLLLFALLIGNMQNFLQALGRRRLEMSLRRR
DVERWMSHRRLPEELRRQVREAERFNWAATRGVNEELLMENLPEDLQREIRHHLFKFVKK
VRIFQLLDEPIVDAICERLRIKTYIKRSKILYRGGLVDKMTFIIRGKMESIGEDNNVVPL
SEGDVCGEELLTWCLEHSSVNKDGRRIRIPGHRLLSNRVVRCITNVEAFILRAADLEEVT
SLFARFLRSPRVQGGIRYESPYWRALAARRIQVAWRYRKKRRLSHADSSISPPNN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggatcctttggaaaaagaagagataccaatgctatcagccacatatttccatgtagat
gacaacagcagttcaacaggcaggcaattttcaactaggacaaggagtgcatcgatgtct
cttcctatgaactctttcgacacctctgaaaatgtgaacaatatcatgggtttcacaggt
cctttgaggaaagaaagacgtaattccttcattcagaggagtggtcctttgtatgtcaac
cgtaaccacgaggctgtttttgaaccaccccaaagcgtattgcaacaaaagaatactgaa
cctaaaattgaaagatattcttcttctattaatgggacgtataataatcaatggccatca
gacaactatgttgacaaaaatgaacatcttctaaagtctggacagttggggatgtgcaac
gatccgtattgcacgacatgccctacttattaccatctgaaagggcgccagaagcaatca
agaacatcggaattatatgatgccaagtttcacaatatgttctatggagatgcaaaaggt
tgggcaaagaaaacatgttcagttctgcttcattatattcctggaatcatgaatcctcat
tcaaaatttgttcaacggtggaacaagttctttgtgatttcttgtttgtttgcagtattc
gtagacccgttattcttctttctgctgtccgtgttgcagggtaacaagtgcattgttttg
aattggcccatgacaacaaccgttgtggtcttgaggagcctgactgacttcatttacttg
attcatatcttcattcagtttaggttggcatatgttgctcccgaatctagagttatggga
gctggagaattagttgatgaccctaaaaagattgcccagaactatctttttggatatttt
acaattgatttttttgttgtacttccccttccacagatcatcatactattgatcttacca
gattccgtgggatcatctggagccaattatgcaaaaaatcttttacgtggagccatactt
gttcaatatgttccgaggctgtacagattctcacctttgctagctggtcaatctcctacg
ggattcgttttcgagtctgcgtgggcaaactttgtcataaatcttctcatttatatgttg
gctagccatgtggtgggctcatcctggtatctcctcggtctacagagagtgaaccaatgc
cttagagatgcttgtcgcagcaccaacatgacgaggtgcatggaattcattgactgcgga
catggaaatgactatggggattttagaagcgattcaacatgggaactgtggaagagcaat
gccaattcaactgcttgtttcgggcaaggcagtttcgattatggaatttatcagaatgct
gttgatctaaccactgaacaaagtgtgatcacgagatatgtgtactcttcgttttgggga
ttccagcaaattagtaccctggctgggaatcaggttccgagttattttgtgtgggaagtt
gttttcaccatgagcatcataggggtgggcctcctgctttttgctctgttgattggaaat
atgcagaatttcctccaggcgcttggccgcaggaggttagaaatgtctttgagacgccgt
gatgttgagcggtggatgagccatcgtcgcttgccagaagaactaagacggcaagtccga
gaagcagagcgtttcaattgggctgccactcggggggtaaatgaagaactgctgatggag
aacctaccagaagaccttcaaagagaaataaggcaccatctctttaagtttgtcaagaaa
gtccggatttttcaactattggatgaacctattgtagatgctatatgcgagcggctgagg
ataaaaacgtacatcaaaagaagcaaaatcctataccgtggcggtcttgttgataaaatg
acatttataattcgaggcaagatggagagtatcggggaagataacaatgtggttcccttg
tctgaaggagatgtttgtggagaagagctactcacatggtgcctagaacattcttctgta
aataaagatggaagaagaatcaggattcctggacacagactgttgagtaacagggtggta
agatgcataacaaacgtggaggcatttattctgcgagcggcagatcttgaagaagttacc
agtctctttgctagattcttgcgaagtccacgagttcaggggggcataaggtacgaatca
ccttactggcgagcacttgcggctagacgaatacaagttgcatggaggtataggaagaaa
agacgtcttagccatgccgactcctccatcagcccaccaaataattaa
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