Primulina tabacum: 142523273
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Entry
142523273 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142523273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142523273
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142523273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
142523273
NCBI-ProteinID:
XP_075483125
LinkDB
All DBs
Position
13:complement(7951753..7964796)
Genome browser
AA seq
1491 aa
AA seq
DB search
MAAWGNGIVMRDVTNAGLVVSDRIGREVAGQMDLEEALEASRYISHPYSTHPREWPPLVE
VVDTWELPPVLIERYNAAGGEGTALCGIFPEIRRAWASVDNSIFLWRFDKWDGQCPEYSG
DEQAICAVGLTKTKSGIFVESIQQLLVLATPVELILVGVCCSAKGDGTDPYAEISLQPLP
EYSIPSDGVTMTCITCTNKGHIFLAGRDGHIYEMQYTTGSGWHKRCRKICLTSGIGSVIS
RWVVPNVFKFGAADPIVEMVLDSERHALYARTEDMKIQVFSLGPNGDGPFKKVAEERNLI
TQRDSHHSGRQHAGTRAPSRSTKSTIVCISPLSTLESKWLHLVAILSDGRRMYLSTASGG
TNSAVGGLGGLGTNHQRTSCLKVETTRPSPPIGVGGSLSLGALSLAGRSQSDDLSLKIES
TFYSSGILVLSDSSPSAASSLLIVNRDPCMQSASSATLGAGERGSRALRESVSSLPLEGR
MLFVADVFPLPETASIIQSLYSGLELCKFHNSWESFEKTSVNLWARGDLFSQHILPRRKI
VIFSTMGMMEVVFNRPIDILRRLLESSSPRSLLENFFNRFGAGESAAMCLMLAARIVYTD
TLVSNVASEKAAEAFEDPRLVGMPQLEGSGALSNTRTAASGFIMGQVVQEAEPVFSGAHE
GLCLCSSRLLLPLWDLPVFIIKGGSGSSDAMPEDGIVACRLSVGAMHVLEDKIRSLEKFL
RSRKNQRRGLYGCVAGLGDISASILIGTGSDLGAGDRSMVRNLFGSYSQNAGSGGSGSLN
KRQRLPYSSGELAAMEVRAMECVRQLLLRCAEALFLLQLLSQHIVARLVQSFDTNTKQAL
VQLTFYNLVCSEDGDRLATRLISGLMEHYTGPSGRGTVDDVSNRLRDGCPSYYKETDYKF
YLAVECLERAAATPDTEERENLAREAFNNLSKIPESADLYTVCKRFEDLRFYEAVVRLPL
QKALTLDPAGDALNDQVDSGIREHALAQRLQCYEIVTAALHSLKDEASEKEFGSSTRNFS
QSVLDLASRKKYICQIIQLGVQSSDKIFHEYLYQTLIDIGLEDELLEYGGPDLVQFLQNA
GRDEVRTVSSILSLIPQTGHSRVPIRSNQIKYFELLARYYVSKQQHVFSAQILVRLAERR
SSEVGDTPTLEQRRQYLSNAVLQAKSAYETDNISVRGVIDNGLLDLLEGKLAVLQFQIKV
KDELEVLASRLEASPSTSEFDMNGSSPANDPPSDAAFVLSVREKAKELSVDLKTITQLYN
EFAVPFELWEICLEMLYFASYSGDADSSIVRETWARLIDQALSRGGIAEACAVLKRAGSH
VFPYDGAILPLDTLCLHLEKAAQERVVSGVELVGDEDIARALLAACKGAIEPVLNTYDQV
LSNGAILPSPILRLRLLRSVLVLLREWAMSILAQKMGTSAVGASLILGGPFSMGQTTLRN
QGIHDKISSAANRYMTEVRRLALPQNQTEAVYRGFQELEESLASPFPPDRF
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatggggaaacggaattgtgatgcgcgacgtcacaaatgccggcttagtggtc
agcgataggattggaagggaggtggctgggcagatggatctggaagaagccctggaagct
tctagatacattagtcatccttattccactcacccacgtgagtggccccctttagttgaa
gttgtggacacttgggagctgcctccggtgctgattgagagatacaatgcagccggtgga
gagggaacagctttatgtggaatatttccagaaatacggcgggcatgggcatcggtggac
aattctatattcctttggcgttttgataagtgggacggtcaatgtccagaatatagtggg
gatgaacaagctatatgcgctgttggtctgaccaaaaccaagtctggcatttttgttgaa
tccattcaacaattactagttttggcaactcctgttgagctgattcttgtaggagtatgt
tgttctgcaaaaggtgacggtactgatccttatgcagagatttcgcttcaaccattgcca
gaatactctattccatcagatggagtgacaatgacctgcatcacttgcaccaataagggt
catatatttcttgctgggcgtgatggccacatttatgaaatgcaatatacaactggttca
ggttggcacaaacgctgtcgtaaaatttgcttaacttctggcattggaagtgtcatctcg
aggtgggttgtccctaatgtgtttaaatttggagcggctgacccaattgttgaaatggta
cttgattccgagaggcatgctttatatgcacgtacagaagatatgaaaatacaagtattc
tctcttggaccaaatggagatggtccattcaagaaggtggctgaagaaagaaatttaatc
actcagagggactctcatcacagtggcagacaacatgcagggacaagagctccatctcga
tccaccaaatcaactatagtttgcatttctcctttatctactttggaatcaaagtggttg
catctagttgctattctgtcagatggtcggaggatgtacctttctactgcatctggtgga
actaatagtgctgttggcggtttgggtgggcttggaaccaatcaccaaagaacaagctgc
ttaaaagttgaaactacccggccttcacctcccataggtgtgggaggcagcctttccctt
ggggcgttatctcttgctggaagatctcagagtgatgatctatctctgaagattgaatca
acattttattcttccggaattctcgtcctttctgattcatccccatctgcagcttcatca
cttctaattgtgaacagggatccctgcatgcagtctgcttcatccgccaccttgggagca
ggggaaagaggttctcgtgcacttagagaatcagtgtcatctttacctttagaaggccga
atgctttttgttgcagatgtttttcccctgccagaaactgcatcaattatacagtcactg
tattcaggattagaattgtgtaaatttcataactcatgggaatcttttgaaaagacttca
gttaatttatgggcaagaggagatctgtttagccagcatattttaccaagaaggaaaata
gttattttcagtaccatgggcatgatggaagtagttttcaacagaccaattgatatcctg
aggagattgctggaatctagctcaccgagatcattactagagaatttcttcaatcgtttt
ggtgctggagagtcagctgcaatgtgcttgatgctcgctgcaaggattgtctacactgat
acccttgttagcaatgttgcctctgagaaagcagctgaagcattcgaggaccctagactt
gttggaatgccacaactcgaaggaagtggtgcattatccaacactagaactgcagctagt
ggtttcatcatggggcaggttgttcaagaggctgagcctgtattttcaggtgctcatgaa
ggcctatgcttgtgctcatcaaggttattgttaccattgtgggaccttcctgttttcatc
atcaaaggtggctcgggatcttcagatgctatgcctgaagatgggattgtagcttgcaga
ctctctgttggggcaatgcatgtccttgaagacaaaattcgctctctagagaagttctta
aggtccagaaagaatcaaaggcgggggctctatggttgtgttgctggtctaggagatata
agtgcttcaattttaatcggtactggatctgatctgggtgctggtgaccgaagtatggtt
cggaacttatttggttcatattctcagaatgctggctctggtgggagtggatcattgaat
aaaaggcagcggcttccctatagttctggggaactggctgccatggaggtgagagcgatg
gagtgtgtaaggcagttgcttcttagatgcgctgaagctttatttcttcttcaattactt
tcacagcacattgtagcacgcttggttcagagttttgatacaaatactaagcaggcttta
gttcagttgacgttctacaatttagtttgttcggaggatggagatcgattggcaacaagg
cttatttctggtctaatggagcattacactggtcctagtggcaggggaacggtggatgat
gttagtaatagactgagggatggttgtccaagctactacaaagaaactgactacaagttc
tacttagcggttgaatgcctcgagagagctgctgcgactcctgacacagaagaacgggaa
aatcttgcaagggaggccttcaacaatttaagtaaaattccagagtctgcggatttatat
actgtatgcaaacgatttgaagatttgagattctatgaagccgtggttcgattaccattg
caaaaggccctgactcttgatccggccggtgatgctttaaatgatcaagtagattcaggg
atccgggaacatgccctagctcaacgattgcagtgttatgagattgtcactgctgctttg
cattctcttaaagatgaagcttcagaaaaggaatttggatcgtcaaccaggaatttttct
caatctgttcttgatctggcctctcgcaaaaagtacatatgtcaaatcattcaactcggc
gttcaatcctctgataaaattttccatgagtacttgtatcaaacattgatcgacataggc
cttgaagatgagttattagaatatggtggtccagacttggtgcagtttttgcaaaatgca
ggacgtgatgaggttcggactgtctcctctattttatcattgattccgcaaacgggtcat
tcaagagttcctatacgatctaatcagataaaatactttgagcttcttgcacgttattat
gtgtcaaagcagcagcatgtattttctgctcaaatattagtgaggctggcggaaagacga
tccagtgaagtgggcgatacaccaactcttgaacaaaggcgtcaatacctgagtaatgct
gttctgcaggcaaagagtgcctatgagacagacaacatttctgtccggggtgttattgac
aatgggcttcttgacttacttgaaggcaagctcgctgttcttcaatttcagataaaggtt
aaagatgaattggaggtgctggcttcaaggttggaggcttctcctagcacatctgaattc
gacatgaatggttcatcgcctgctaatgatccgcccagtgacgctgcttttgtgctttcc
gtgcgagaaaaggcaaaagagttatcagtggatttaaagaccatcactcaattatataat
gagtttgctgtgccatttgaactctgggagatttgtcttgaaatgctgtattttgcaagc
tattctggtgatgccgatagcagcattgtcagagaaacctgggctaggctcattgatcaa
gctctttcaagaggtggcattgctgaagcttgtgctgtgctgaagagggctggttcccat
gttttcccttacgatggagctatcttaccattagatacactgtgtcttcaccttgagaaa
gctgcacaggagcgtgtggtttcaggggttgaactcgtcggagatgaagatatagccagg
gctcttcttgctgcttgcaagggtgcaatagagcctgtattgaatacttatgatcaggtt
ttatcgaatggagctattctaccatctccaattttaaggttacgccttcttaggtctgtt
ctcgttcttcttcgcgagtgggcaatgtcgattcttgcacagaaaatgggcacaagtgct
gttggagcttctttgattcttgggggaccattttcaatggggcaaactacattaagaaat
caagggattcatgataaaatcagcagtgcggcaaataggtatatgaccgaggtgcggagg
ttggcccttccacaaaatcaaacagaggctgtttaccgtggtttccaggagctcgaagaa
tcactcgcgagccctttccctcctgatcggttttga
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