KEGG   Primulina tabacum: 142523396
Entry
142523396         CDS       T11246                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ptab  Primulina tabacum
Pathway
ptab04142  Lysosome biogenesis
ptab04144  Endocytosis
ptab04145  Phagosome
ptab04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142523396
   04145 Phagosome
    142523396
   04142 Lysosome biogenesis
    142523396
   04148 Efferocytosis
    142523396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptab04131]
    142523396
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptab04147]
    142523396
   04031 GTP-binding proteins [BR:ptab04031]
    142523396
Membrane trafficking [BR:ptab04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    142523396
Exosome [BR:ptab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142523396
  Exosomal proteins of other body fluids (saliva and urine)
   142523396
  Exosomal proteins of colorectal cancer cells
   142523396
  Exosomal proteins of bladder cancer cells
   142523396
GTP-binding proteins [BR:ptab04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    142523396
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase cobW ATP_bind_1 AAA_22 Septin AAA_7 PduV-EutP Vel1p AAA_16 SRPRB AAA_24 TniB nSTAND3 AAA_5 NACHT
Other DBs
NCBI-GeneID: 142523396
NCBI-ProteinID: XP_075483293
LinkDB
Position
13:complement(31626648..31629326)
AA seq 217 aa
MAMPKRRLLKIILLGDSGVGKTSLMNQYVSKKFNQLHKATIGADFVTKELAIDEKFVTLQ
IWDTAGQERFRSLGVSFYRGADCCILVYDVNVVKTFETLQNWYKEFLKQIGPASPETFPF
VLIGNKVDVDGGNSRVVSEKTAREWCISKGNVPYFETSAKEDYNVDAAFTCVANAALAND
PSLNIWEPDEEIPSHCDLQRIPESISGTEQRGGGCAC
NT seq 654 nt   +upstreamnt  +downstreamnt
atggccatgccaaaaagaaggttgctcaagatcattctccttggtgacagtggggtggga
aagacatctctgatgaatcaatatgtatcgaaaaaattcaatcaactccacaaagcaaca
attggtgctgattttgtcaccaaagagctggcgatcgacgaaaagtttgtgacgttgcaa
atatgggacacggcgggacaagagcgtttccgaagcctgggtgtttcgttctacagagga
gcagattgctgtatactcgtgtatgacgttaatgtggtcaaaacatttgagacacttcaa
aattggtacaaagaatttctcaagcagattggtcctgcatcccctgagacattccccttc
gtgctaatcggtaacaaagtcgacgtagacggcggaaacagccgtgttgtctctgagaaa
acagctagagaatggtgcatttccaaagggaacgtaccatatttcgagacgtcggccaag
gaagattacaatgtagatgctgctttcacttgtgtagccaatgctgcacttgctaatgat
ccatcgttgaatatatgggagcctgatgaagaaatcccatcccattgtgatctgcagcga
atcccagaatcaatttctggaacggagcaaagaggaggaggatgtgcatgttga

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