Primulina tabacum: 142523439
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Entry
142523439 CDS
T11246
Name
(RefSeq) putative pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142523439
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142523439
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142523439
NCBI-ProteinID:
XP_075483359
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All DBs
Position
13:complement(38530470..38533507)
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AA seq
343 aa
AA seq
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MASNMRSIKFNSLLILFYAFASILPTLRANFAEFDEFWQTRAAQAWNRTLESYEPEPHKI
VSHLNMNVHRTLKEIGLDHSSSKNSSRRLLGKGSYSGPCQATNPIDRCWRCQPDWASNRF
RLADCGLGFGYKAKGGKNGKIYVVTDSSDSDVLNPKPGTLRYAVIQKEPLWIIFERDMMI
KLTQELIMESNKTIDARGARVHIANGAGITIQFVSNVIIHGLRIHDIVQGSGGLVRDSID
HFGLRTRSDGDGISIFGAQDIWIDHVSMTNCYDGLIDAIMGSTGITISNGHFTDHNESML
FRASDSHSQDEIMQITVAFNHFGKRMVQRMPRCRWGYVHVYYD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaacatgcgaagcattaaatttaattccttactcatcttgttctatgctttt
gcttcgattcttcccaccctgagagctaattttgcggagtttgatgagttctggcaaacg
cgagccgcccaggcctggaatcgaacgctggaatcttacgagccagaaccacataaaata
gttagccacttgaatatgaatgtccacaggacattgaaagaaataggactggaccattcg
agctcaaaaaatagctcgagaagactgctgggaaagggttcctacagcggcccatgccag
gccacgaatcccatcgacaggtgctggagatgccagcccgattgggcttccaaccggttc
agactcgcagactgtgggttaggcttcggctacaaggcaaagggcggaaagaacgggaag
atctacgtggtgaccgactcctcggacagcgacgtcctgaacccgaaaccaggcactcta
cgctatgcggtgatccagaaggagccactttggatcatattcgagcgcgacatgatgatc
aagctaacgcaggagttgatcatggagagcaataagaccattgacgctcgtggggcgagg
gttcacatcgctaatggagccgggatcacaatccagttcgtgagcaatgtgatcatacat
gggttaaggattcacgatatcgttcaagggagtggtggcttggtgagggactccatagat
catttcgggttaaggacgaggagcgatggtgatgggatttccatttttggagcccaggat
atatggatcgatcatgtgtcgatgacaaattgctacgacggccttatagatgcgatcatg
ggctcgactggcatcaccatctccaacggccatttcaccgatcacaacgagtcgatgctt
ttcagggcgagcgacagccactctcaagacgagataatgcagataacggtagcattcaac
cacttcggtaagagaatggtgcagagaatgccgaggtgcagatggggttacgtccatgta
tattatgattaa
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