Primulina tabacum: 142524056
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Entry
142524056 CDS
T11246
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptab Primulina tabacum
Pathway
ptab00061
Fatty acid biosynthesis
ptab00071
Fatty acid degradation
ptab01100
Metabolic pathways
ptab01212
Fatty acid metabolism
ptab04146
Peroxisome
Module
ptab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
142524056
00071 Fatty acid degradation
142524056
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
142524056
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptab01004
]
142524056
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142524056
Enzymes [BR:
ptab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
142524056
Lipid biosynthesis proteins [BR:
ptab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
142524056
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of breast milk
142524056
Exosomal proteins of breast cancer cells
142524056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
142524056
NCBI-ProteinID:
XP_075483906
LinkDB
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Position
2:complement(1989473..1994478)
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AA seq
661 aa
AA seq
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MEKFGVKVEEGREGRDGKPSVGPVYRNLLAEHAFPPINPELSTAWQIFRTSFEKYSGNRM
LGWRELVDGKWGPYKWKTYKEAYQETLLVGSALRAHGIEPGARVGIYGANCPQWIVAMEA
CNAHSLICVPLYDTLGAGAVNYIIDHAELDIVFVQDKKVKQLMSPECTSAQRIKFIVCFS
SLTEGQRDEAAAIGIKPYSWTEFLAVGREKPSGIFSPKPSDACTIMYTSGTSGDPKGVIL
THENIITCISGVEKFMEQFEDKMTVDDVYISFLPLAHILDRMIEEFFFYKGASVGYYHGE
INEIRDDLVELKPTFLAGVPRVFERVHEGVLKAVEELNPRRRRIFSWLYKYKLFWMNRGY
KQKDASPLADLLAFGKVKNRLGGRIRLIVSGGAPLSTEIEEFLRVTSCAFVVQGYGLTES
CGLATLGFPDEMCMIGTVGSSFMYTEIRLEEVPEMGYDPLANPSRGEICIKGKSAFAGYY
KNPELTQEVVQDGWFHTGDIGEMLPNGIIRIIDRKKNLIKLSQGEYVAVEYLEKVYGITP
IVEDIWVYGDSFKSKLVAVVVPNEDNTMKWGKQNGHKESTFLELCSLNQLKDHIILELKS
TADRNKLRGFEYIKDIIVEPELFELSEKELVTATLKKRRDRMLKNYKEEIDGLYRVLNRA
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttcggtgtcaaggtggaagaaggaagggaaggccgagatggaaagccatcg
gttggtcccgtgtatcgtaatctactcgcggagcatgcgtttccgccgattaatcctgag
ttatccaccgcttggcaaattttcagaacttcatttgaaaagtactctggcaatagaatg
ctgggatggcgtgagttggtcgacgggaagtggggcccttacaagtggaagacatacaag
gaagcgtaccaggaaactctgcttgttggttcggcattgcgagcgcatggcattgaacct
ggagctcgagttggaatttatggcgcaaattgtcctcagtggattgtggcaatggaggcc
tgcaatgctcacagtttaatttgtgttcctctctacgacactcttggggctggagctgtg
aactacataatagatcatgctgagcttgatatcgttttcgttcaagataagaaagtgaaa
caactaatgagccctgaatgcaccagtgctcaaaggataaaatttattgtgtgcttctct
tcattgacagagggacagcgggacgaagcagccgctatcggcatcaaaccttactcttgg
accgaatttcttgctgtgggaagagaaaagccatcgggaattttttcaccaaagccatct
gatgcatgcacgattatgtatacaagtggaaccagcggcgatccaaaaggtgtaattttg
acccatgaaaacattataacatgcattagcggggtcgaaaaattcatggagcaattcgaa
gacaagatgacagtggacgatgtgtacatatctttcctaccccttgctcacattctcgat
cgcatgattgaagaattctttttctacaagggtgcttcggtcggatactatcatggggaa
atcaacgaaataagggacgatttggtggagttgaaaccgacatttttggcaggagtacct
cgagtttttgaaagagtgcatgaaggggtcctcaaagctgttgaagaactcaaccctagg
aggaggaggattttcagctggctttacaaatacaaacttttttggatgaatcgcgggtac
aaacaaaaagatgcatcaccactggctgatctacttgcttttggaaaggtcaaaaacagg
ttaggtggaaggatccgtctcatagtgtccgggggtgcgccattgagcaccgagatagaa
gaattcctacgggtcacatcctgtgcttttgtggtacaaggatatgggttgactgagagt
tgtggattggcaacgctgggttttccagatgagatgtgcatgattggaacagttggctct
tctttcatgtataccgaaatccgtctggaggaagttccagagatgggctatgatccactt
gcgaatccttctcgtggtgaaatatgcatcaaagggaaatcagcgtttgcaggatactac
aagaacccagagttgactcaggaagtagtccaagacggatggttccatacgggtgacatc
ggagagatgttacccaatgggatcattagaattatcgacaggaagaagaacctaatcaag
ctctctcagggagagtatgttgcagttgaatatcttgaaaaagtttatggtatcaccccg
attgtggaagatatatgggtgtacggggatagcttcaagtcgaagctagtcgcagtagtt
gttccaaacgaagacaacaccatgaaatggggaaagcagaatggccataaagaatccacc
tttctggagctatgctctttaaaccagctcaaagatcacatcatccttgagctcaaatct
acagccgacagaaataagctgagaggtttcgagtacatcaaagatataatcgtggaacct
gagctatttgaattgtctgaaaaagaattggtgacagcaacattgaagaagagacgagac
agaatgcttaagaattacaaggaggaaattgatgggctctatcgagtgctgaacagagct
aagtag
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