Primulina tabacum: 142524089
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Entry
142524089 CDS
T11246
Name
(RefSeq) hyperosmolality-gated Ca2+ permeable channel 2.1-like isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptab02000
]
142524089
Transporters [BR:
ptab02000
]
Other transporters
Pores ion channels [TC:
1
]
142524089
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
142524089
NCBI-ProteinID:
XP_075483936
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Position
14:37696172..37701375
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AA seq
768 aa
AA seq
DB search
MTTHFLMFSVSQCSETEMDVSSLLTSAAINTAVCVAFFSLYSVLRKQPSLLSVYFGQRLS
QVRLKRHDPFCFERLFPSASWIVKAWEASEDELYAIGGVDAVVFLRAVVFSVRILTVAGI
ICLFLVLPLNYNFGIEMEHKQFPDEPLNVFTIGNVKEGSRWLWAHCLALYIITCCACILL
YFEYKNITKMRLAYITSSVSHPSHFTVLVRAIPWSREEAYSDTLTKFFTNYYSSSYLLHQ
MIYQSGAVQKLMSDAEKMYKILRTTGMEQSCGSKFMRCGFCGGTNAASFKILSIEPESSK
GRSSFDGSDTRKKECGAALVFFRTRYAALVASEVLQAPNPMSWVTDSAPEPRDVYWSNLC
VPYRLLWIRKIAVLVASILFVIFFLIPVVFTQSLVHFEKLKKIFPFLRDIGQRKFVEQVI
TGYLPSVIFMIFLYFVPPLMMVFSTLEGSISRSSRKRSTCIKVTYFVIWNVFFANILTET
AIDHYQISIMKLGDPKNIPNLLAKAVPSSATFFMTYVLTSGWASLSVELIQPFPLVCNLF
YRFILQNKDETTYGTYTFPYHTEVPRVLLFGLLGFTCSTLAPLILPFLLVYFVLAYFVYR
NQILNVYVTKYQTGGLYWPVVHNTTIFSLVLTQIIALGVFGIKESSVALSFTIPLIVCTL
LFNEYCRQRFHPVFRKTPAKVRERAPEIIIEMDRQDEHCGRMEEIHQKLQSAYCQFTSRS
NGLQKTIEQNSHACELDNTEIGNICMHEDLEDVTPGKRTIRLPGSLVG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacactttctaatgttctctgtttcccagtgtagcgagacagagatggacgtc
tcctctcttttgacttctgctgctatcaatacagctgtatgtgtggcgtttttctcgttg
tactctgttttaagaaaacaacctagtctcctgagcgtctattttgggcaaagactttcc
caggtgagattaaaacgccatgatcctttttgcttcgagcgactctttccttctgctagt
tggatagtgaaggcctgggaagcctcagaggacgagttatatgccattggtggtgtggat
gctgtagtctttctccgtgcggttgtcttcagtgtcagaatattaactgttgctggtatc
atatgcttgtttcttgttcttcccctaaattataatttcggaattgagatggagcacaaa
caattccctgatgagccattgaatgtgttcaccattgggaatgtgaaggaagggtcgaga
tggctttgggctcattgtcttgcactatacatcataacatgctgcgcttgtattctcctc
tactttgaatataaaaacatcacaaaaatgagattggcgtacatcacttcttctgtttcc
catccaagtcactttacagtgcttgttcgtgcaattccatggtctcgggaagaagcatac
agcgatacattgacaaaattctttacaaattattattcgtcaagctatttgttgcaccaa
atgatctatcagtccggagcagtccagaaattgatgagtgatgctgagaaaatgtataag
attctgaggaccaccgggatggagcaaagctgtggatcaaaatttatgagatgtggcttt
tgtgggggaactaatgcagcatctttcaaaatcctttctattgagcctgaaagttccaag
ggaagaagcagctttgatgggtcagatacaaggaagaaggaatgtggggcggctctggtt
tttttcaggactcgttatgctgctttggttgcttcggaggttcttcaagcaccaaatccc
atgtcctgggtgactgactctgctcctgaacctcgtgacgtgtactggtcaaacttgtgt
gtaccgtatcggctcctgtggatccgtaaaattgctgtcctcgtggcctcgatccttttt
gtgattttcttccttatacctgtggtgtttacacaaagccttgttcattttgaaaagcta
aaaaagatttttccgttcttgagggatatcggacagaggaagtttgttgaacaagtgata
actggatatctaccaagtgttatattcatgatctttctgtactttgtaccaccactaatg
atggtattctcgacattggagggctcaatttctcgtagcagccggaaacgaagtacatgc
attaaagttacttacttcgtcatatggaatgtattctttgccaatattcttacagagact
gccatagaccactatcaaatttcgatcatgaaattgggggatcctaaaaacataccaaat
ttgcttgctaaagcagtgccttcatcggcaacattctttatgacgtacgttctcacctca
ggctgggcaagcttgtccgttgaactcattcagccatttcctttagtctgcaacttgttt
tacaggttcattctccaaaacaaggacgagacaacatatggaacatatacctttccgtac
catacggaagtaccaagagtcctccttttcggactcctaggtttcacttgttccacactg
gcacctcttattttgcctttcttgctggtatactttgtccttgcctatttcgtgtaccgc
aatcagatattgaacgtgtatgtaacgaaatatcagacaggcggactgtattggcctgtg
gtgcacaacacaacaatattctcgttggtgctgacacaaataatagcattgggagttttt
ggaatcaaagaatcgtcggttgctttaagctttaccattccactaattgtttgcacgcta
ctcttcaatgagtattgtaggcaaaggtttcacccagtctttagaaaaacaccagccaag
gtgagagagagagctcctgaaattatcatagaaatggaccggcaagatgagcactgtgga
cggatggaggagattcatcagaagctgcaatccgcttattgtcagtttacttcaagatcc
aatggtttgcaaaaaaccatagaacaaaacagccatgcatgcgaattggataatactgag
ataggtaacatttgcatgcatgaagatctagaggacgtcacacctgggaagagaaccatc
cgattgcctgggtccttagttggatga
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