Primulina tabacum: 142524112
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Entry
142524112 CDS
T11246
Name
(RefSeq) THO complex subunit 5B
KO
K13174
THO complex subunit 5
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142524112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142524112
03041 Spliceosome [BR:
ptab03041
]
142524112
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
142524112
Spliceosome [BR:
ptab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
142524112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
142524112
NCBI-ProteinID:
XP_075483986
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All DBs
Position
14:complement(37092521..37097729)
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AA seq
812 aa
AA seq
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MEETMAEPGEILPERNVDMAALYDVLQRGKTSIEDIVAKMLAIKKEATPQSNLRELVTQV
LLNFVSLRQANRSILLEEDRIKAETERAKTPVDFTTLQLHNLMYEKNHYVKAIKACKDFK
TKYPDIDLVPEEEFFSDATEEIKSPVLSTDSNHDLMLKRLNYEQFQRKELCKLHDKLEQQ
KKALQETIANRKKFLSSLPSHLKALKKASLPVQHQLGVLHTKKLKQQQLAELLPPPLYVT
YSQLFAQKEAFGENIELEITGNIKDALAFARQLANKDTATSTNSENSKLEDDMPDEDDDG
QRRRKRPKKVPGRENLDQSGIYQSHPLKISLHIHDDEASNSNLAKLITLKFEYLIKLNVV
CVGVEDSDEVPPNSILCNLFPDDTGLELPQQSAKLCIGDSCSFDVSRALRPYKWAQHLAG
IDFLPEVSPLVSVSEDPNKETAKHSSILSGLSLYRQQNRVETVVQRIRARKKAQLALEEL
LGSLMKRDWPTLTCENVPWTSHTPRCNLHGWLSLAFACDSNTSLPVTDVRQGERPASFDE
YSKSALSREEMETTTEDGELPSLLPVATGVNNVKLTPSKGNEVEHSRKLSFISKSIVSPI
SKGKSHSFKKYEEDIDLMVESEIELDEPVQVEEVSDDASPLGGLGMVENSWADCGVQEYS
LVLMRGSDNSSENMKLEAKIKISAEYPLRPPHFELSIHGSSHGENDSKGKDSKWSNELRA
MEAEVNVHMIKTIPFDQENSVLGHQVLCLAMMFDFFLDDEHASPEKRTCTSVIDVGLCKP
VIGRLISRSFRGRDRRKMISWKDHICTPGYPY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacgatggctgagcctggcgaaatactgccggagcgtaacgtagatatggct
gcgctatacgatgtgttgcagcggggcaagacttcgatcgaggatatcgtagccaaaatg
ttggccatcaagaaagaagctactccccaatccaatctccgtgaactcgtcacgcaagtt
ctcctcaatttcgtctcccttcgtcaggccaacaggtccatcttgcttgaagaagatcgg
attaaagccgaaacagagcgtgctaagaccccggtggacttcacaaccttgcagctccac
aacttgatgtacgagaaaaatcactacgtcaaagcgataaaagcttgcaaagatttcaag
actaagtaccctgacattgatcttgtacctgaggaagagtttttctctgatgctacagag
gagataaaaagcccagtattatcaactgatagcaaccatgacttgatgctcaaaaggctc
aactatgagcaattccagcgtaaagaattatgtaagctacatgacaaattggaacaacaa
aagaaagctcttcaagagacaattgctaacaggaaaaaattcttatcaagtctcccttca
cacctcaaagctctgaagaaagcatccttgcctgtgcagcatcagttaggtgttctgcac
accaagaaactaaagcagcagcaattagcagaactgcttccacctcctttatatgtgacc
tattctcaattatttgctcaaaaggaagcctttggagagaatattgaactggagattact
ggaaatattaaggatgctttggcttttgcccgtcagctagcaaacaaggacactgctaca
tctacgaactcagagaattccaagttagaagatgacatgcctgatgaagatgatgatggt
caaaggaggagaaagcgaccaaagaaggttccaggcagggaaaatcttgaccagtctgga
atatatcagagtcatcctctgaaaatttccctgcacatacatgatgatgaggcttccaat
tcaaacttggcaaaacttatcaccttgaagtttgaatatttgataaagttgaacgttgtg
tgtgtaggagtggaggattctgacgaagttcctccaaatagtatattgtgtaacttgttt
cctgatgacactggtcttgagctccctcagcagtcagccaagctctgcattggagattct
tgttcctttgatgtaagcagagctttacgaccatataaatgggctcagcatttggcaggc
attgattttttgccagaggtgtctccactggtttcagtttctgaagatccaaataaggaa
actgctaagcactcttccattttatcgggtctgtcattgtaccgtcagcagaatagggtt
gagacagttgtgcaaaggattcgtgctcgaaaaaaggctcagctggctcttgaggagtta
cttggttcactaatgaagcgtgattggccaactctaacctgtgaaaatgttccatggacc
tcgcacaccccacgctgcaacttgcatggctggttatccttggcttttgcatgtgatagt
aatacatctttgcctgtaactgatgtccggcaaggagagcgtcctgcgagttttgacgaa
tacagcaaatctgctttgtccagagaagagatggagaccacaacagaggatggggaactt
ccatctttgcttccagttgctactggtgttaataatgttaaactgactccatcgaaagga
aatgaagttgagcattccagaaagctgagcttcatttcaaagagtatcgtatctccaata
agtaaaggaaagtcacatagttttaagaagtatgaggaggatatcgatctcatggtggaa
tctgaaattgaactggatgagccagtacaagtagaggaggtgtctgacgatgcatcacca
ttgggaggactaggaatggtcgagaattcatgggctgactgtggggtccaagaatatagt
cttgtactaatgagaggatcggataatagtagcgagaacatgaaattagaagccaagata
aagataagtgcggagtatcctcttaggccgccccattttgaacttagtatacacggttca
tctcatggtgaaaatgattcgaagggtaaggattccaagtggtccaatgaacttcgtgca
atggaggcagaggtcaatgttcacatgataaagacgatacctttcgatcaggaaaattca
gtgttaggtcaccaagtgctttgcctggcgatgatgtttgatttcttcttagatgatgag
catgcatctcctgagaagagaacttgtacttcagtgattgatgttggtttatgcaagcct
gtgattggcaggcttatctctcgatcctttagaggcagagatcgaaggaaaatgatttct
tggaaggaccacatttgcactcctggctatccttattag
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integrated database retrieval system