KEGG   Primulina tabacum: 142524112
Entry
142524112         CDS       T11246                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
ptab  Primulina tabacum
Pathway
ptab03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142524112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142524112
   03041 Spliceosome [BR:ptab03041]
    142524112
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     142524112
Spliceosome [BR:ptab03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    142524112
SSDB
Motif
Pfam: FmiP_Thoc5 RWD
Other DBs
NCBI-GeneID: 142524112
NCBI-ProteinID: XP_075483986
LinkDB
Position
14:complement(37092521..37097729)
AA seq 812 aa
MEETMAEPGEILPERNVDMAALYDVLQRGKTSIEDIVAKMLAIKKEATPQSNLRELVTQV
LLNFVSLRQANRSILLEEDRIKAETERAKTPVDFTTLQLHNLMYEKNHYVKAIKACKDFK
TKYPDIDLVPEEEFFSDATEEIKSPVLSTDSNHDLMLKRLNYEQFQRKELCKLHDKLEQQ
KKALQETIANRKKFLSSLPSHLKALKKASLPVQHQLGVLHTKKLKQQQLAELLPPPLYVT
YSQLFAQKEAFGENIELEITGNIKDALAFARQLANKDTATSTNSENSKLEDDMPDEDDDG
QRRRKRPKKVPGRENLDQSGIYQSHPLKISLHIHDDEASNSNLAKLITLKFEYLIKLNVV
CVGVEDSDEVPPNSILCNLFPDDTGLELPQQSAKLCIGDSCSFDVSRALRPYKWAQHLAG
IDFLPEVSPLVSVSEDPNKETAKHSSILSGLSLYRQQNRVETVVQRIRARKKAQLALEEL
LGSLMKRDWPTLTCENVPWTSHTPRCNLHGWLSLAFACDSNTSLPVTDVRQGERPASFDE
YSKSALSREEMETTTEDGELPSLLPVATGVNNVKLTPSKGNEVEHSRKLSFISKSIVSPI
SKGKSHSFKKYEEDIDLMVESEIELDEPVQVEEVSDDASPLGGLGMVENSWADCGVQEYS
LVLMRGSDNSSENMKLEAKIKISAEYPLRPPHFELSIHGSSHGENDSKGKDSKWSNELRA
MEAEVNVHMIKTIPFDQENSVLGHQVLCLAMMFDFFLDDEHASPEKRTCTSVIDVGLCKP
VIGRLISRSFRGRDRRKMISWKDHICTPGYPY
NT seq 2439 nt   +upstreamnt  +downstreamnt
atggaggagacgatggctgagcctggcgaaatactgccggagcgtaacgtagatatggct
gcgctatacgatgtgttgcagcggggcaagacttcgatcgaggatatcgtagccaaaatg
ttggccatcaagaaagaagctactccccaatccaatctccgtgaactcgtcacgcaagtt
ctcctcaatttcgtctcccttcgtcaggccaacaggtccatcttgcttgaagaagatcgg
attaaagccgaaacagagcgtgctaagaccccggtggacttcacaaccttgcagctccac
aacttgatgtacgagaaaaatcactacgtcaaagcgataaaagcttgcaaagatttcaag
actaagtaccctgacattgatcttgtacctgaggaagagtttttctctgatgctacagag
gagataaaaagcccagtattatcaactgatagcaaccatgacttgatgctcaaaaggctc
aactatgagcaattccagcgtaaagaattatgtaagctacatgacaaattggaacaacaa
aagaaagctcttcaagagacaattgctaacaggaaaaaattcttatcaagtctcccttca
cacctcaaagctctgaagaaagcatccttgcctgtgcagcatcagttaggtgttctgcac
accaagaaactaaagcagcagcaattagcagaactgcttccacctcctttatatgtgacc
tattctcaattatttgctcaaaaggaagcctttggagagaatattgaactggagattact
ggaaatattaaggatgctttggcttttgcccgtcagctagcaaacaaggacactgctaca
tctacgaactcagagaattccaagttagaagatgacatgcctgatgaagatgatgatggt
caaaggaggagaaagcgaccaaagaaggttccaggcagggaaaatcttgaccagtctgga
atatatcagagtcatcctctgaaaatttccctgcacatacatgatgatgaggcttccaat
tcaaacttggcaaaacttatcaccttgaagtttgaatatttgataaagttgaacgttgtg
tgtgtaggagtggaggattctgacgaagttcctccaaatagtatattgtgtaacttgttt
cctgatgacactggtcttgagctccctcagcagtcagccaagctctgcattggagattct
tgttcctttgatgtaagcagagctttacgaccatataaatgggctcagcatttggcaggc
attgattttttgccagaggtgtctccactggtttcagtttctgaagatccaaataaggaa
actgctaagcactcttccattttatcgggtctgtcattgtaccgtcagcagaatagggtt
gagacagttgtgcaaaggattcgtgctcgaaaaaaggctcagctggctcttgaggagtta
cttggttcactaatgaagcgtgattggccaactctaacctgtgaaaatgttccatggacc
tcgcacaccccacgctgcaacttgcatggctggttatccttggcttttgcatgtgatagt
aatacatctttgcctgtaactgatgtccggcaaggagagcgtcctgcgagttttgacgaa
tacagcaaatctgctttgtccagagaagagatggagaccacaacagaggatggggaactt
ccatctttgcttccagttgctactggtgttaataatgttaaactgactccatcgaaagga
aatgaagttgagcattccagaaagctgagcttcatttcaaagagtatcgtatctccaata
agtaaaggaaagtcacatagttttaagaagtatgaggaggatatcgatctcatggtggaa
tctgaaattgaactggatgagccagtacaagtagaggaggtgtctgacgatgcatcacca
ttgggaggactaggaatggtcgagaattcatgggctgactgtggggtccaagaatatagt
cttgtactaatgagaggatcggataatagtagcgagaacatgaaattagaagccaagata
aagataagtgcggagtatcctcttaggccgccccattttgaacttagtatacacggttca
tctcatggtgaaaatgattcgaagggtaaggattccaagtggtccaatgaacttcgtgca
atggaggcagaggtcaatgttcacatgataaagacgatacctttcgatcaggaaaattca
gtgttaggtcaccaagtgctttgcctggcgatgatgtttgatttcttcttagatgatgag
catgcatctcctgagaagagaacttgtacttcagtgattgatgttggtttatgcaagcct
gtgattggcaggcttatctctcgatcctttagaggcagagatcgaaggaaaatgatttct
tggaaggaccacatttgcactcctggctatccttattag

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