KEGG   Primulina tabacum: 142524131
Entry
142524131         CDS       T11246                                 
Name
(RefSeq) WD repeat-containing protein PCN-like isoform X1
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
ptab  Primulina tabacum
Pathway
ptab03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    142524131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptab03009]
    142524131
Ribosome biogenesis [BR:ptab03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    142524131
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_RIG_2nd EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_Vps41 WDR90_beta-prop_4th PEP5_VPS11_N
Other DBs
NCBI-GeneID: 142524131
NCBI-ProteinID: XP_075484023
LinkDB
Position
14:complement(37546418..37552337)
AA seq 816 aa
MLKVHRSSSVEWNPSPVVALATSADGSQVAAARADSSLEIWLVSPGSVGWHCQLTIHGDP
NTRVSSLVWCHSGPTGASLGRLFSSSIDGSISEWDLFDLRQKRVLDSIGISIWQIAAEPC
YDLLFNAKQEINSHENGHTSSINSCLEEESSESEDDNDDKDAIEHHEDIDAKSTHLAAAC
DDGCVRVYGVSDAEKLTYNRTLPRVGGRTLSVAWSPDASRIYSGSSDGFIRCWDAKLAHE
IYRITVSIGGSGSGSDLCIWYLLALRCETIVSADSSGSVQFWDSQFGTLLQAHTYHKGDV
NALAATPNHNRVFSTGADGQVILYKLSNGAVGSCDGKSSAVKKWTYIRGVRAHTHDVKAL
TVAVPINHDADLPPEEKVKRSRGKEKSHFSYHEWAHLGVPMLISAGDDTKLFAYSAMMFD
KFSPHDICPAPQRMPMKLVMKTVFNQTPLLLIQAAHWLDIYCVRLENCSVSDISPGPSGG
LATTDLVARVKCKASRKITCSTISSSGTSFAYSDHVKPNLFELKRSKSGRSVWTVNKRQL
PVEIPFAHCMIFSSDSSRLLLAGQDRRIYVVNVGSAEVVHVFTPCSKDDVEELPPCEPPI
TKMFTSIDCQWLAAINCFGDLYIFNLETLRQHWFLSRLDGASVTAGGFTPQNSNILIIST
SSNQVYALDVEAKQLGEWSIQHTFSLPRRYQEFPGEVIGLSFPPSSSSSVIVYSPRAMCL
IDFGLPVDRDDDVEFANDQGLARKLHSKGVLKHKRKVHELETKHGGRKNFEICPFRDPVL
FVEHLSKNSLLVIDKPWIQVVKTFDTQPVHRHIFGT
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgcttaaagtccatcgaagcagttcggtggagtggaatccatcccctgtcgttgcccta
gccaccagcgcagacggctctcaggtcgccgccgctcgcgccgacagctctcttgagatt
tggctggtctccccaggctccgttggttggcactgtcagcttaccattcacggggacccc
aatacgagagtttcatctctggtgtggtgtcattccgggccgacaggtgcatctctgggt
cgactgttctcgtccagcatcgatggctctatttctgaatgggatttgtttgatttaaga
caaaagagggttctggattcgatagggatttcaatatggcaaattgctgctgaaccatgc
tatgatttgctcttcaacgcgaagcaggaaattaattctcatgaaaatggtcacaccagt
tcaattaatagctgtcttgaagaggagagtagcgaaagtgaagatgacaatgacgacaag
gatgctattgagcatcatgaggatattgatgctaagagtacccatctagcagctgcttgt
gatgatggctgcgtgcgagtttatggtgtttcagatgcagagaaacttacttacaacagg
acgttgccaagggtcggtggacgcacattaagtgtggcatggagtcctgatgccagcagg
atttattcagggagtagtgacggattcataaggtgttgggacgctaagctagctcatgag
atctacagaataactgtttcaattggaggttccgggagtggaagtgatctttgcatatgg
tatttgcttgcattgagatgtgaaacaatcgtcagtgcggatagttctggtagtgtgcaa
ttctgggacagtcaatttgggacgcttctgcaggcacatacttatcataagggtgatgta
aacgccttagcagcaactcctaaccataacagagtgttctccactggtgctgatggtcag
gtgatactttataaactttccaatggtgctgttgggtcttgtgacgggaagtccagcgct
gtcaaaaaatggacatatattcggggtgtaagggctcatacacatgatgtcaaggcattg
actgtagcagtacctattaaccatgatgcagatctacctcctgaggaaaaggttaaaagg
tcacgtggcaaggaaaagtcacatttcagttaccatgagtgggctcatttgggtgtgccc
atgcttatctcagctggcgatgacactaaactattcgcatactctgctatgatgtttgac
aagttttctcctcatgatatatgccctgcaccacagagaatgcccatgaagctagtgatg
aaaactgttttcaatcaaacaccattgcttttgatccaggctgctcactggttagacatt
tattgtgtgcgtctagaaaattgttctgtctccgacatcagccctgggccgtctggtggg
cttgcaaccacagatttagtggcgcgagttaaatgcaaagcttctcgaaagatcacatgc
agtacaatttcttcatcaggcacgtcatttgcctactccgaccatgtgaaacctaattta
tttgaattgaaaagaagtaaatctggcaggagtgtgtggacagtaaataaaaggcagctt
cctgtggaaataccatttgcccactgcatgatatttagttctgattcttcacgtttgtta
ttagctgggcaagatagaaggatatacgttgtaaatgtggggagtgcggaggttgttcat
gtctttactccttgttccaaagatgatgttgaggaattgccaccttgtgaacctcccatt
acaaaaatgttcacgagtattgattgccagtggctagctgccattaactgctttggagat
ttatatattttcaatcttgaaacattgaggcaacactggttcttatcaagattggatggg
gcctctgttacagctggtggttttacgcctcaaaatagtaatattcttatcatttccacc
tcatcaaatcaagtttatgcattggatgtggaggccaaacagttgggcgaatggtccatt
cagcatacattttctctgcccagaagatatcaggaatttcctggagaagtgattggtctt
tccttcccaccatcctctagttcttctgttattgtctacagtcccagggcaatgtgcttg
attgattttgggttgcctgttgatagagacgatgatgttgagtttgcaaatgatcaagga
ttagcaagaaagctacacagcaaaggggttctaaagcataagcggaaagttcacgaatta
gaaactaaacatggtggtagaaaaaattttgaaatttgtcctttcagggatcctgtttta
tttgtcgaacatctttcaaaaaattctctcttggtcatagacaaaccatggatacaagtc
gttaagacttttgatactcaacctgttcacagacatatttttgggacatga

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