Primulina tabacum: 142524218
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Entry
142524218 CDS
T11246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptab03009
]
142524218
03036 Chromosome and associated proteins [BR:
ptab03036
]
142524218
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142524218
Ribosome biogenesis [BR:
ptab03009
]
Eukaryotic type
Pre-60S particles
Helicases
142524218
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
142524218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
Peptidase_S76
ResIII
FlpD
Motif
Other DBs
NCBI-GeneID:
142524218
NCBI-ProteinID:
XP_075484208
LinkDB
All DBs
Position
14:3779476..3785417
Genome browser
AA seq
698 aa
AA seq
DB search
MPSIGLSESQSSAKMKKLNKAETFSLDGDDSIKKKMKKEKKSSNKTRPTSEQDPDDSNSN
IILKKSKEKKRKVLEVEMDDSTEERSETSSEIGEPINDLGKQKKMKLHEDEEKENPNAVK
NFRISEPLREALKYKGIQSLFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPMLESLT
SGPAKASRKTGYGRAPSVLVLLPTRELATQVFSDFEVYGGALGLNSCCLYGGSPYQPQQI
QLKRGVDIVVGTPGRIKDHIERGNLDFGALKFRVLDEADEMLRMGFVEDVELILGKVEDA
SKVQTLLFSATLPDWVKKISTKFLKPGKKTADLVGNEKMKASTNVRHIVLPCSSSARSQL
IPDIISCYSSGGRTIIFTETKDSASTLSGLLPGARALHGDIQQATREVTLSGFRSGKFST
LVATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKSGVAVMLYDPRKSNFSR
IEREAGVKFEHISAPQPADIAKAAGADAAEKISEISDSVIPVFKAAAEELLNSSDLSPAE
LLAKALAKAAGYTEIKSRSLLTSMENNVTVLLECGKPIHSPSFAYGVLRRFLPEEKVVSI
KGLSLTSNGNGAVFDVAAEDLDMFLAGQENAAGVSLEVVKSLPSLQQKEQASGGRFGGGG
GRGGGGYSGRRNGGFSGGRGGFPNRRGARGRGNSGRKW
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgattggtttatcagaatcacagtcctccgccaagatgaagaaattgaacaaa
gctgaaactttctccttggatggtgatgattccattaagaaaaagatgaagaaagagaaa
aaatccagcaataagacgagaccaacctccgagcaggatcccgatgattcaaattccaat
atcattctgaaaaagagcaaagagaagaagcggaaggtgttagaagtcgagatggacgat
agcacggaggagaggagcgagactagctcggagattggcgagcccatcaatgatttgggt
aagcagaaaaagatgaaattgcatgaggatgaggagaaagagaaccctaatgccgtgaag
aatttccggatttcagaaccactgagggaggcattaaagtataaggggattcagtcgttg
tttcctattcaggcaatgacgttcgatactattctggatggctcagatttggttggaagg
gcacgtactggtcagggtaaaacattggcgttcgtgttaccaatgttggaatcattgaca
agtggacctgcaaaagcatcccggaagactggctacggaagggcacctagcgttcttgtg
cttttgcccactagggaattggccactcaggtgttttctgacttcgaagtatatggtggg
gcattagggttgaattcatgttgcttgtatgggggttctccataccagccacaacagatt
caattgaaaagaggtgtcgatatagttgttggtactcctggtcgtatcaaggatcacata
gaaaggggaaatctcgatttcggggcactaaaatttcgagtacttgatgaagctgatgaa
atgttgaggatgggctttgttgaagacgttgagcttattttaggcaaggtagaggatgct
agtaaagtccagacgttgctctttagtgccactttaccagactgggtgaagaagatttca
actaaatttttaaaaccgggtaagaagactgccgaccttgttggcaatgagaaaatgaag
gctagcaccaacgtgaggcatattgttcttccttgttcaagttctgccagatcacagctt
atacctgatataattagctgctacagtagtggaggacgcactattatttttacggagaca
aaggattctgcttcaacgctttctggattactgcctggagctcgtgctttgcatggtgac
atacagcaggccacacgtgaggtcacactttctggatttaggtcaggcaaattttcaaca
cttgtggctacaaatgttgctgcacgtggattggatattgatgatgtccagttaatcatt
cagtgtgagcctcctcgtgatgtagaggcatatattcatcggtctggaagaacagggaga
gcaggtaaatctggtgttgctgtaatgctttatgatcccaggaaatcaaacttttctagg
attgaaagagaagcaggtgtcaaatttgaacacatttctgctccgcagccagcagatata
gctaaagctgctggtgcagatgctgcggaaaaaatttctgagatctctgatagtgtcatt
ccggttttcaaggctgctgctgaggagctgctgaattcatctgatttatcaccagcagaa
ctactagctaaggcactggccaaggccgccggttataccgagatcaagagtagatcactt
ctcacttccatggagaacaatgtcaccgttcttctcgaatgtggaaagcccattcactca
ccatcttttgcatacggggttctacggagatttttgcctgaagagaaggttgtgtcaatt
aaaggactttctttaacatccaatgggaatggtgcggtgtttgatgtggctgccgaagac
ctggacatgttccttgctggccaggaaaatgctgctggggtgagtttagaggtagtgaaa
tctttgcctagtttgcaacaaaaagagcaggcaagtggcggaagatttggaggtggcggt
ggccgaggaggtggcggctactcgggtaggagaaatggtggattttctggtgggagaggt
ggatttcctaatagacgtggagcaagaggtcgtggaaatagcggccgcaaatggtga
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