Primulina tabacum: 142524342
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Entry
142524342 CDS
T11246
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142524342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142524342
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142524342
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
142524342
NCBI-ProteinID:
XP_075484400
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Position
14:complement(35851231..35854890)
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AA seq
372 aa
AA seq
DB search
MFQLFRAIRQRIPMVFGAFESMSIKDDIHGEMGGPCEGLKMSEWKDIPVELLLRILSMVD
DQMVIVASGVCHGWRDAIFWGLTHLSLSWCKKDMNNLVLSLVPKFTKLQVLILWQDSPQL
LDAAVETIARYCSDLQELDLSKSFRLTDRSLYALAHGCPNLLKLNLSGCSSFSDSAVGYL
SGFCQKLKALNLCGCVKAASDRALKAIGCNCNNLQSLNLGWCDRVGDEGVKSLAYGCPGL
RALDLCGCVLITDESVIALANNCLHLRSLGLYYCQNITDKAMYSLAQRRVKNKQETWTSV
KKNRDEEEGLTNLNISQCTALTPPAVQALCDSFPALHTCPGRHSLIISGCLNLTSVHCAC
AVQTHRAAHLAH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaattatttcgagcaataaggcagaggataccgatggtttttggtgcttttgaa
agtatgagtataaaggatgacattcatggggaaatgggtggtccatgtgaaggtttaaag
atgagtgagtggaaagatattccagtggagcttttgctgaggattctttctatggtggac
gatcagatggtcattgtcgcatctggggtttgtcatggctggagagatgccattttttgg
ggccttactcatctctccttgtcttggtgcaagaaagacatgaataatcttgttttatca
ctagttcccaaattcaccaaactccaggttctaatcctttggcaagattcgcctcagctc
ctagatgctgctgttgaaactatcgcacgatattgtagtgacctgcaagagttggatctc
agtaaaagttttagacttacagatagatcattgtatgccttggctcatggttgcccaaat
cttttaaagctaaacttaagtggttgttcgtcctttagtgattccgctgtgggatactta
tctgggttttgccaaaagttgaaagccttgaatctttgtggatgtgtgaaggcggcatct
gatagggctttgaaggcgattggatgcaactgtaataatttgcaatcattgaatcttgga
tggtgtgatcgtgttggtgacgaaggggtaaagagtttagcctatggttgccctggcctc
agagctcttgacttgtgtggatgtgttctaataacagacgagagtgtgatagcactggca
aacaactgccttcacctaagatccctgggcttgtattactgccagaacatcaccgataaa
gcgatgtattctctagcacagaggcgagtgaaaaacaagcaagaaacttggacatctgtt
aaaaagaacagggacgaggaagaaggcctcacaaacctgaacatcagccaatgcaccgcc
cttacacctccagctgtacaggccttatgcgactcatttccggctcttcatacatgccct
ggtcggcattccctgattataagcggctgtcttaacttaacgtcagtgcattgtgcgtgt
gctgttcagacgcaccgtgctgcacacctagctcattaa
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