Primulina tabacum: 142524738
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Entry
142524738 CDS
T11246
Name
(RefSeq) DNA polymerase lambda-like isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ptab Primulina tabacum
Pathway
ptab03410
Base excision repair
ptab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
142524738
03450 Non-homologous end-joining
142524738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142524738
Enzymes [BR:
ptab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
142524738
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
142524738
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
142524738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
NTP_transf_2
PTCB-BRCT
IMS_HHH_1
HHH_5
BRCT_2
RTT107_BRCT_5
Cortex-I_coil
Motif
Other DBs
NCBI-GeneID:
142524738
NCBI-ProteinID:
XP_075484936
LinkDB
All DBs
Position
14:complement(5109156..5121186)
Genome browser
AA seq
555 aa
AA seq
DB search
MQRSLQFTNSLSFLAATRAEMAPKRSKSPPSDPHGMFSQMAVFLIETGVKAAQLQIWKQK
LMQMGAKIEDRLSKKVTHIFAADFNSLRRKIGQEMLNRFEGKVVNYQWLENSLRIGEKVP
EDSYVLSAGLGGNVRSNNHEENRVKVSHFREDNPSQKKKLKTSVGSEESNEISENARHHS
SKSDIASGSPGSSRSLSPEVTSPTYYDQNRDVSTSEASLLYNPPDLNKNITDIFKKLVDI
YRALGDDRRSFTYHKAIPVIEKLPFRIVSADQVKHQPGIGKSLQDHVQEIVNTGKLSKLE
HFEKDEKVRTISLFGEVWGIGPTTASKLYEKGHRTLDDLRNEESLTNTQMIGLKYFDDIK
TRIPRQEVQEMENLLQKVGEEISPGVEIVCGGSYRRGKASCGDLDIIVTHPDGKSHIGFL
PKFVRRLKDINFLREDLVFSVHSDEGTDSGVDTYFGLCTYPGRELRHRIDFKVFPRDIYA
FGLIAWTGNDVLNRRLRLLAETKGFKLDDTGLFPATQSSGGKRGSKGSASLKFATEKQVF
DFLEFPWLEPYERNL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaagtctgcaatttacgaactcgctgtcatttctagcagctaccagagcagaa
atggcgccaaagaggagcaaatctccaccgtctgatccacacgggatgttttcgcaaatg
gctgtcttccttattgaaactggagtaaaagctgctcaactgcagatatggaagcaaaaa
ttgatgcaaatgggtgcgaaaattgaggatcgtttatccaaaaaggtcacgcacattttt
gctgcggatttcaattctcttcgcaggaaaatcggtcaggaaatgttaaaccggtttgaa
ggaaaagtagtcaactatcagtggctagagaacagcttgagaataggagaaaaagttcca
gaagattcatacgttctatctgctggtctggggggaaatgttagaagcaacaatcatgag
gagaaccgtgtgaaggtaagtcattttagagaggacaatccctctcaaaagaagaagctt
aaaacatctgttgggtcagaagaaagcaatgaaatttcagaaaatgctcgtcatcattct
tccaaatcggatattgccagtggttcacctggttcctcacgctctctaagcccagaagtg
acaagtccaacatattatgatcaaaatagagatgtctccacatccgaagcatcattactt
tacaatcctccagatttgaacaagaacataactgatatatttaagaagctcgtcgacatt
tacagagccttgggtgatgataggaggtcttttacctatcacaaagctatcccagtcatt
gaaaaactacctttcagaattgtaagtgcagaccaggtcaaacaccaacctgggattgga
aagtcactgcaagatcatgttcaggaaatagtaaacactgggaagctatccaagttggag
cacttcgagaaggatgaaaaggttcgtacaatcagcttatttggagaagtatggggcatc
ggacctactactgcaagtaaactttatgagaaaggacacaggaccctggatgacttgagg
aatgaggaatcactaacaaatacccagatgataggattaaaatactttgatgacatcaag
actagaattcctcgtcaagaggttcaagaaatggaaaatcttctgcaaaaagtcggagaa
gagatttcacctggggtagagattgtctgtggaggatcatatagacgtgggaaggcctct
tgtggggatttggacattattgttactcatcctgatgggaagagtcatatcggctttctt
ccaaaatttgtgaggcgcctcaaggacataaattttttaagagaagatctggtttttagt
gttcatagtgacgagggtactgactctggagtggacacatattttggtctctgcacttat
ccaggtcgagagttgcgacatcgcatagatttcaaggtttttcccagagatatttatgca
tttggtttaatagcatggacagggaatgatgtactcaacaggaggctacgattattggca
gaaacgaagggattcaaacttgatgacactggtctgtttccagcgactcaaagttcaggt
ggcaaaaggggaagcaaaggtagtgcaagtttaaagtttgcgactgaaaaacaggtgttt
gatttcctcgaatttccatggctcgaaccctacgaaaggaatctatga
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