KEGG   Primulina tabacum: 142524995
Entry
142524995         CDS       T11246                                 
Name
(RefSeq) protein SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
ptab  Primulina tabacum
Pathway
ptab03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142524995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142524995
   04131 Membrane trafficking [BR:ptab04131]
    142524995
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     142524995
Membrane trafficking [BR:ptab04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    142524995
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st ANAPC4_WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML WDCP
Other DBs
NCBI-GeneID: 142524995
NCBI-ProteinID: XP_075485275
LinkDB
Position
14:complement(31552768..31561910)
AA seq 325 aa
MDKHVLTLDKGTTCIAWNHSGQRLAAALYDGSLSIYDSTDPASSVFSCTSRFKVQEGSIL
KVIWVPPEFGDVLACISANGILSLWEEVAEGTEGNRWKLCKSFERNTGQVLDAQFGDCHT
SLKLVAAFADGKVKIYELLDILDLEKWQLQAQLQNVVDVVSEFGNASCLSASISWNPQKG
EVQQSSFILGFSSNMPSLNFPKVWEYDQDHQRWLPVAELSMPEDKSDQVYAVAWAPNIGR
PYELIAVATEMGIRVWHLCLNPDADGRLPVNQVAMLHGHDGEVWQMEWDMSGMTLATSGT
DGVVRLWQANLNGVWHEQAVLAPAS
NT seq 978 nt   +upstreamnt  +downstreamnt
atggataaacacgttttgacgcttgataaggggacgacttgcattgcgtggaatcatagt
ggccagagattggctgctgctttgtatgacggctcattgtccatttatgattcaacggat
ccagcgtcttctgttttcagttgcacctccagatttaaggtccaagaaggcagcattttg
aaagtgatctgggttccaccagaattcggagatgtacttgcttgcattagtgccaatggc
attttgtctttgtgggaggaagttgccgaaggtactgaaggcaatcggtggaagctgtgt
aaatcatttgaaagaaacactggccaagttctagatgctcaattcggtgattgtcataca
agtttgaaattggttgctgcatttgcagatggtaaagtaaaaatctacgagctacttgat
atacttgatttggagaagtggcaacttcaggctcaattacaaaacgtagttgatgtggtg
tccgagttcggtaatgcttcctgtctgtctgcttccatctcttggaatccacaaaaaggt
gaagtccagcagtctagctttattttgggctttagctctaatatgccatcactaaacttc
cctaaggtctgggagtatgatcaggatcatcaaagatggcttccagttgcagaactttcc
atgccagaggacaagagtgatcaggtctatgcagttgcctgggcacctaacataggcagg
ccttatgaactgattgctgtggcaactgaaatgggaatcagagtctggcacctttgcttg
aaccctgatgctgatgggaggcttccggtgaatcaagttgcaatgctccatggccatgat
ggtgaggtatggcagatggaatgggacatgagcggaatgacactggccacttctggaact
gatggtgtagtcaggttgtggcaggcaaatttgaacggagtttggcacgagcaagctgtt
ttggcacctgcaagttaa

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