Primulina tabacum: 142526206
Help
Entry
142526206 CDS
T11246
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12119
cryptochrome 2
Organism
ptab Primulina tabacum
Pathway
ptab04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
142526206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
142526206
NCBI-ProteinID:
XP_075486570
LinkDB
All DBs
Position
15:32924306..32928610
Genome browser
AA seq
652 aa
AA seq
DB search
MESNCKSIVWFRRDLRIEDNPALAAAARDGSVLPVFIWCPKEEGQYLPGRVSRWWLKQSL
IHLKQSLKSLGAEFVLIKAQSTLSALLDCISSVGATKVVFNHLYDPVSLVRDHNIKQKLS
DMGVSVQSYNGELLHEPWEIYNDDGNAFTTFKAFWNKCLDVQMEPAAHIPPCQLVPAAGK
VENCSIEALGLEDESEKSSNALLGRGWSPGWTNSDKAFTEFVENHLLNYSKDRLRVGGNC
TSLLSPHLHFGELSIRKVFQCIRMKQIVWKNEQNLFGEESANLFLKAVGLREYSRYICFN
FPFTHERSLRGNLKFFPWNADQARFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVS
SFFVKFLLLPWQWGMKYFWDTLLDADLESDVLGWQYISGSLPDGHEIDRMDSPQVQGFKF
DPDGEYVRQWLPELARIPTEWIHHPWDAPLIVLTSAGVDLGSNYPNPIVDIDLARVGLTE
AISIMHTKEAAANANGTDEVVFDNSETYANSSIPNVVVKGRTPFSAISSYDQRVPSMQNS
RSKKRQERGKDEGNLRGRCDGVESLKMDDDLCSTAESSSNKKQLTRSRYSFSVPQCCSAM
SKDASAQVQDSSDLMDKWQEEIDSEKMMNENGSIHLHTSRDEITTEEERSFI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaattgcaaaagcatagtgtggtttaggagggatttgaggattgaagacaat
cctgctttagctgctgctgctagggatgggagtgtattaccagtttttatatggtgtcct
aaagaagaaggccaatatttacctggtcgagtttcacggtggtggcttaagcaatcactt
attcatttgaagcaatctttgaaatctctcggggctgaatttgtgctgatcaaagcacag
agcactctttctgctctattggattgcataagttctgttggggcgacaaaagtcgtgttt
aaccatctctatgatcctgtttcacttgtccgtgatcacaatatcaaacaaaagttgagt
gatatgggagtaagtgttcaaagctacaatggtgagctattgcacgagccttgggaaata
tacaatgatgatggaaatgcttttacaacatttaaagcgttttggaataaatgtttagac
gtgcaaatggaacccgctgcacatattcctccctgccagttggttccagctgcaggaaaa
gtggagaattgttctattgaggcgttgggtcttgaagatgaatcagaaaagtcgagtaat
gcattactgggaaggggttggtcaccaggttggaccaattctgacaaggcttttaccgaa
tttgtagaaaatcatctgctcaactactcgaaagatagactcagggttggggggaactgc
acgtccctcttgtccccgcaccttcattttggggagctaagcataaggaaagttttccag
tgtataaggatgaaacaaatagtttggaaaaacgaacaaaatttgtttggggaagagagc
gcaaatctttttctcaaggccgttggattaagggagtattcccgatatatatgttttaat
ttcccatttactcatgagagatcattgcggggcaacttgaaattttttccttggaatgct
gaccaagcacgattcaaggcttggcgacagggccgaacgggttatccattagttgatgcg
gggatgagagagctttgggctactggatggattcacaataggataagagtgatagtttca
agtttctttgtgaagtttcttctcctaccgtggcaatgggggatgaagtatttctgggat
acgcttctggatgcagacctggaaagtgatgtcctgggatggcaatacatctccggaagt
ttgcctgatgggcatgaaattgaccgaatggatagcccacaggttcagggattcaagttt
gatccagatggtgaatacgtgaggcagtggttacccgagttagcacgaattcctaccgag
tggattcatcatccatgggatgctcctcttatagtgctcacatctgctggcgtagacttg
gggtccaactaccctaaccctatagtcgacatagatttggcaagggttgggctaaccgaa
gccatatcaattatgcacacgaaagaagcagcggcaaacgccaatggaacagacgaagtc
gtatttgataactctgaaacctatgccaattcgtccattcctaacgtagttgtgaaggga
aggactccgttttcagcgatttcatcttacgatcaaagggtgccgtctatgcagaattca
agaagcaagaaaagacaggaacgggggaaagatgaagggaatttgcgtggcagatgtgac
ggagttgaatccttgaaaatggacgacgatttgtgctcgacagctgaatcttcttcgaat
aaaaaacagttaaccagaagtagatattcattctctgttccacaatgttgttcagcaatg
tcaaaggacgcatcagcacaagttcaagattcctctgatctcatggacaaatggcaagaa
gaaatcgactctgaaaagatgatgaatgaaaatggatccatccatttacatacttcaaga
gatgagattactactgaggaggaaagatcatttatttga
DBGET
integrated database retrieval system
