Primulina tabacum: 142526334
Help
Entry
142526334 CDS
T11246
Name
(RefSeq) long chain base biosynthesis protein 1-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ptab Primulina tabacum
Pathway
ptab00600
Sphingolipid metabolism
ptab01100
Metabolic pathways
ptab04382
Cornified envelope formation
Module
ptab_M00094
Ceramide biosynthesis
ptab_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
142526334
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142526334
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptab01007
]
142526334
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
142526334
Amino acid related enzymes [BR:
ptab01007
]
Aminotransferase (transaminase)
Class II
142526334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
142526334
NCBI-ProteinID:
XP_075486768
LinkDB
All DBs
Position
15:2214503..2221458
Genome browser
AA seq
496 aa
AA seq
DB search
MDTMLALFESMVKWFSDWVTSVLDAPSARAVIFGVPIGGHLFVEGLLLVVILFLLSQKSY
KPPKRPLTKKEVDELCDEWVPESLIPSITKERKYEPPVLESAAGPHTVINGKDVVNFTSA
NYLGFLGHEKLQKSCTKALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTTDSILYSY
GLSTMFSTIPAFCKKGDIVIVDEGVHWGIQNGLHLSRSTIIFFKHNDMKSLQSNLEKVTH
DNKRAEKLRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVILDESNSIGVLGSSGRGLT
EHCRVPVEKVDIVTAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAI
TAIDILEENPHVLTKLKENVAILHKGVSEIQGLEIASDPRSPIVFLKLKKSAGSLKADLQ
VLQDICDHLLKDYSIFVATSKRSTVDKCKLPAGIRLYVSASHTESDLRNASESLKKVAAF
VLAGEWFHLPDYVPLF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggatacaatgttggctctgtttgaaagtatggtgaagtggttttcagattgggtgaca
tcggtccttgatgcaccttctgctcgagctgttatctttggagttccaataggaggccat
ctttttgtggagggtcttctcttggttgtaattctttttcttctatcccaaaaaagttat
aagccacctaaaagaccattgacgaagaaggaagtagatgagttatgtgatgaatgggtc
ccggaatccctcattccttctattactaaagagaggaagtatgaacctccggtgttggaa
agtgctgctggacctcatactgtaatcaatggtaaagatgttgtgaatttcacatcagca
aattatcttggctttttagggcatgagaaactgcaaaaatcatgtaccaaagcactggaa
aaatatggtgttggttcttgtggtcctcgtggattttatgggacaattgatgttcacctt
gattgtgaggccagaatagcaaagtttcttggaaccactgactctatactctattcctat
gggctttccacaatgtttagtacgattccagcattttgtaaaaagggtgatattgtcatc
gttgatgagggagtccactgggggatacaaaatggccttcacctctctagaagtactata
atttttttcaaacacaatgatatgaagtccttacagagtaatttggaaaaggtcacccat
gacaacaaacgagctgagaagcttagacgatatatagtggtagaagcaatatatcagaat
tctggtcaaatcgctccattggatgagatcatcaagctgaaggagaaatatagattccgt
gtaatcctagatgaaagcaattccattggtgttcttggaagttctggtagaggcctaacc
gaacattgcagagttccggttgagaaggtagatattgtcactgctgcaatgggacacgca
ttggccactgaaggaggattttgtactgggagtgcccgagttatcgatcatcaacgtctt
agtagttctggttatgtattttctgcctctttgcccccttatctggcaagtgctgccatt
actgccatcgacatcttggaagaaaatccacacgttctcacaaaattgaaggaaaatgta
gctattctacataaaggtgtgtcagagatacaaggacttgaaatagcaagtgatccacga
tcacccatagtttttcttaagctcaaaaagtctgcaggatccttgaaggcagatctacaa
gtgcttcaagatatttgcgatcatttactgaaggactactccatctttgtggcaacttca
aaaagatccacagtagacaaatgcaaattacctgctgggattaggctatatgtgtctgct
tctcatacggaatccgatctaagaaatgcaagtgaatcattgaagaaagttgctgctttt
gtactggcaggtgaatggttccatcttccagattatgttccattgttttag
DBGET
integrated database retrieval system
