Primulina tabacum: 142526364
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Entry
142526364 CDS
T11246
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142526364
03012 Translation factors [BR:
ptab03012
]
142526364
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
142526364
mRNA cycle factors
Stress granule specific factors
142526364
Translation factors [BR:
ptab03012
]
Eukaryotic type
Initiation factors
eIF-4
142526364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
CNOT1_CAF1_bind
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
142526364
NCBI-ProteinID:
XP_075486818
LinkDB
All DBs
Position
15:32090758..32101811
Genome browser
AA seq
1805 aa
AA seq
DB search
MTHNPSKADRSESTQHKKPDRSGGFNQQRQFSGSVSSKGGGGASSAPLNYSNRGVKKYNG
NAPGVQSRPRSPNVNSGFSNLYTSHAVQNDAHKQQPANRVSDAPVTCSASNVDSMDATPQ
KINQVVPRPPSSDISVASPSSNPFTAGSEPKAHTIPAKPPGDASRSFPLQFGSISPGLMN
GAQIPARTSSAPPNLDEQKKDQVRHQSLRTAAPAKPLSSIPKQLSTKKDAGTFDQSNAGE
SQPVSLSRRDTQVSAAPPMAQTQKPSVLSVPGVPMQLPFHQSQVAVQFGGTNPQIQSQSM
SGTSLQLSMPMPMPMPLPMGNPPVQQSMFVSGLPPHPMQSQGMMHQGQALNFPSPMGPQL
PSQLGNLGMNMVPQFPQQQAVIYGGSRKTVKITHPETHEELRLDGSPGLRSHSNVQPQSQ
HIPSFPPNHLINFYNANSFYFPAASSVPPNSTQVPPTSQPPKFYNQVTIKPAIDPHGEKE
LLKPTSSISVGKAQSLKPSKLHMDDLPQPQKEIGPSASGVLPESKPGPGTSLTSELPSSS
VDVEVNVLATSAVKFAAGDGFASKSTTLTEEASNGVVVPDPIKNKHKSDNIGQQDQVSWQ
STSHLNYPLQLPETEAVKAKSASSRTNIVSEPVQELFSTTVGASSEASKVSSEVAAERKT
SDTLKSLDNSYIKSRRLKPDSLGGKEDAEDMMLNTNQNSLDTLTKPLSLESSEICEVEES
SLQEVASTADGLLERAKQKTKEPSGCGYDDIKMDDHVFESTHAAYCEGVENSASVNGLSA
QDINIIISDTPLSIPDNISTMPAAVDQESSPVLVASLEGPLRYENEDNNLNSCGIISPSA
VITKENIFSDTSVQKSVVLRGKKKKKELYKKAEAAGTSSDMYMAYKGPEEKKENATLAED
LKNISSSSIKQTSVDVPNQNALLTEKPAQSRVAPDDWENAAEIPTPQPDSLNNEIQSHDR
DGDGLMIKRYSRDFLFKFAEQCTDLPEAFEIMSDVVDTFMVSSSRFSREPHPSPGRNIDR
PAGGSRLDRRGGDLGNEEKLSKFPVHLVSGRGDTRVDVGYVGNVTGFRNSHGGNYGVPRN
PRGQTSVHYSVGILSGSIQSPDLQGGLQRNNSDSDRWQRGAGLQKGLIPYPQTPLQVMHK
AEKKYEIGKITDEEEAKQRQLKSILNKLTPQNFEKLFEQVKEVNIDNFVTLSGVISQIFD
KALMEPTFCEMYANFCFHLAAGLPNLRVDNETITFKTLLLNKCQEEFERGEREEEEANKA
EEEGENKRTAEEREEKRLQARRRMLGNIRLIGELYKKKMLTARIMHECINKLLGQYQTPD
EENIEALCKLMSTIGEMIDHPKAKEHMDAYFDIMANMSNNMELSSRVRFMLKDVIDLRKN
RWQQRRKVEGPKKIDEVHRDAAQERQAQASRLGRAPSMGSSVRRGPPVDFAPRTPSMLPF
PNSQLSGSRAVPPQTRGYGSQDVRTEERHSLESRTMSVPLSQRPLGDEPITLGPQGGLAR
GMAFRGQPSAPSIPLPELPNPGDSRRTGHGLNGFSSMPDRYGQRGDFTPRYMPDIFAAPP
NYDQSHPPDEKVAHGNREIRNADHGFDRSLPAPPPTRGAPPLSMQDVSSEIVWPEERLRD
KSMAAIKEFYSARDENEVALCIKDLNTPSFYPSMISLWVIDSFEKKDVERDLLTKLLISL
VKRQDGMINKDQLIKGFEYVLSVLEDTVNDAPRAAEFLSRILAQVILENIVGLSAIGRLI
YEGGEEQGSLVEIGLAAEVVGGILEIVKSVKGDSILSEMRSSSNLQLENFRPPGAKKSWR
LDKFL
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgacccataatccatcaaaggctgacaggagtgagtctacgcagcataagaaaccagat
cgatctggaggcttcaatcagcagcgccaattctccgggagtgtctccagtaagggtggt
ggcggcgcctcctccgcccccttaaattattctaatcgtggtgtcaagaaatataatggc
aatgcaccaggagtacagtcaaggcctagaagcccgaatgtgaattcaggtttcagtaat
ttgtatacatcgcatgcagtgcagaatgacgctcacaagcagcagccagccaacagagtg
tctgatgctccagttacttgttcagcttccaatgtcgattcgatggatgctacacctcaa
aaaatcaaccaagttgttccaaggcctccatcttctgatatttctgttgcatctccgtcg
tccaatccttttactgctggttctgaacccaaggcccatactatacctgctaaacctcct
ggagatgcatcaaggtcatttcccttgcagtttggatccataagtcctggtttaatgaat
ggtgcgcagatacctgctcgaacaagctctgcaccaccgaatttggatgaacaaaaaaag
gatcaggtccggcatcaatctttaagaactgctgctcctgcaaaaccactttcatctatt
cccaaacagctttcgacaaagaaggatgctgggacttttgaccaatctaatgctggtgaa
tctcagccagtgtccttgtctaggagggatactcaagtttccgctgcaccacctatggct
caaactcagaagccttctgtactctctgtccctggtgtgcccatgcagctaccgtttcac
cagtcacaagtcgctgttcagtttggcggtaccaatccacaaattcaatctcagtctatg
tcaggaacatcattgcaattgtcaatgccgatgccgatgccgatgcccttgccgatgggt
aacccaccagtgcagcagtccatgtttgtttcaggtcttccaccacatccaatgcagtct
caaggaatgatgcatcagggacaggccttgaactttccatcaccaatgggtcctcagtta
ccttctcagttgggaaacttaggaatgaatatggtcccacagtttcctcagcagcaggct
gtcatatatggcggttctcgtaaaaccgtgaagatcactcatccagaaactcatgaagag
ttgaggcttgatggctcacctggtctaaggtcacattctaatgtgcaacctcaatcacag
catattccatcttttcctcccaatcacctgataaatttttacaatgccaattctttctat
tttcccgctgctagctctgttcctcctaatagtactcaggttccgcccacttctcagcca
ccgaagttttataaccaggtgacaataaaaccagccattgaccctcatggggagaaagag
ttattaaaacctacaagttctatatctgttggaaaggcgcaatctttgaagccttcaaag
ttacacatggatgatttgccccagccacaaaaagaaattgggccttcagcttctggtgtt
ttgccagagtcaaagcctggaccaggaacatcattgacctctgagctgccatcaagttct
gttgatgtagaggttaatgtactcgccacttcagctgttaaatttgctgctggtgatggt
tttgcatcaaagtcaaccacattgactgaggaagccagtaatggagtggttgttcccgat
cccatcaaaaacaagcataaatcagacaacattggccagcaggatcaggtcagctggcaa
tcaacctctcatttaaattatcctcttcaacttccagaaactgaagctgtaaaagctaaa
tctgcttcatcgagaactaatattgtatccgaacctgtgcaagaattgttttcaacaact
gtaggtgcgtcttctgaggcttccaaagtttcaagtgaagttgctgcagaaaggaagacc
agtgacacacttaagagtttagacaactcgtacataaaaagcagacggttaaaacctgac
tcacttggtggaaaggaagatgcagaagacatgatgttgaacaccaatcagaatagtttg
gatacattaacgaaacctctttctttagaatcatcagagatttgtgaagtagaggagagc
tcattgcaggaggttgcatctactgcagatggtttattggaacgggcaaagcaaaagaca
aaagaaccttcaggttgcggctatgatgatatcaaaatggatgatcatgtatttgagtct
actcacgcagcatattgtgaaggtgttgagaattctgcatcagtgaacggtttatctgct
caagatataaatattataatttcagacacgccattaagcatacctgacaacattagcaca
atgcctgctgcggtagatcaggagtcttcccccgttttagttgcatctcttgaaggtcct
ttgagatatgaaaatgaagataataacctcaatagttgtggcataatttctccttctgca
gttatcaccaaagagaacatcttttcagatacaagtgtgcaaaaaagtgttgtactcaga
ggaaagaagaaaaaaaaagagttgtataaaaaagcagaagctgccggtacgagttcggat
atgtatatggcatacaagggtcccgaggaaaagaaagaaaacgctacgcttgcagaggat
ttaaaaaacatttcaagctctagcatcaaacagacatctgttgatgtacctaaccaaaat
gccttgttaactgagaaaccagctcaaagtagagttgcgccagatgattgggaaaatgcc
gctgaaatccctactccacagccagattctttaaataatgaaattcagagtcatgataga
gatggcgatggcttgatgataaaacggtattctcgagatttcctcttcaaatttgcagag
caatgtactgatctcccagaagcatttgaaattatgtctgatgttgtggacacatttatg
gtatctagttcccgtttttcacgcgagccacatcctagtcctggacgaaacattgataga
ccagctggaggctcaaggttggatcgacgtggaggtgacttgggaaacgaggaaaaattg
agtaaatttcctgtacacctcgtgtcaggtagaggagacacgcgagtagacgttggttat
gtgggtaatgttaccgggtttcgaaatagtcatggaggcaattatggtgttccaaggaat
ccacggggtcagacatccgtccactattctgtgggcattctctctgggtcaatccagtcc
cctgatctccagggaggcctgcaaagaaataactccgattctgacaggtggcaacgtgga
gctggtttacagaagggtttgattccttatcctcagacccctctacaagtcatgcacaaa
gctgagaaaaaatatgagattggtaagatcactgatgaggaagaagcaaaacagaggcag
ttgaagtctatcttgaacaagcttaccccacaaaacttcgagaagctgttcgaacaagtg
aaagaagtgaacattgacaattttgttactttgtcaggggtgatctctcagatttttgat
aaagctctgatggagcccaccttttgcgaaatgtatgccaacttctgttttcaccttgca
gctggtttacctaatttgagagtggacaatgaaacaatcactttcaaaacgctactcctg
aacaaatgtcaagaagaatttgagaggggagaaagagaggaagaggaagcaaataaagca
gaggaagaaggtgagaataaacgtacagcagaagagagagaagagaagagactccaagcg
aggagacgcatgttgggtaatattagactaattggagagctgtacaagaaaaaaatgttg
actgcgagaataatgcacgagtgcattaataagttgttgggtcagtatcaaactcccgat
gaagaaaatattgaagcgttgtgcaaattgatgagcacgatcggtgagatgatagatcat
cctaaagcaaaggaacacatggatgcctattttgacattatggctaatatgtcaaataat
atggagctgtcatctagggtaaggttcatgcttaaagatgttattgatcttagaaagaat
aggtggcagcagaggaggaaagttgaaggtccaaaaaaaattgacgaggtacacagagat
gctgctcaagagaggcaagcacaagctagtaggttaggtcgtgctccgagtatgggtagc
tctgtcagacggggtccacctgtcgattttgctcctcgaactcctagtatgttgcctttt
ccaaattcccagttgagcggctctcgtgctgtcccacctcagacacgtggttatggttct
caggatgttaggaccgaagagagacattcccttgagagtaggacaatgtctgttcctctg
tctcaaagacctcttggggatgagcctataactcttgggcctcaaggtggtcttgcaagg
ggaatggctttcagggggcagccatcagcacctagtattcctctgcctgagttgccgaat
cctggagattcaaggaggacgggacatggtctgaatggattcagttcaatgccagatcgt
tatggccaaagaggggatttcacaccaagatatatgccagacatttttgctgctccgccc
aattatgatcagtcgcatccaccggatgaaaaagttgcccatggcaatagagaaattaga
aatgcagatcatggctttgatagatctcttcctgctcctccacctactcgtggtgcaccc
ccattaagtatgcaagatgtgtcttcagaaatagtgtggccggaagagcgcctgcgggac
aagtccatggctgcaattaaggagttctacagcgcgagagacgaaaatgaagttgcttta
tgcatcaaggatttgaatacccccagcttttatccatctatgatatctctctgggtcatc
gattcttttgagaaaaaagacgtggaaagagatctcttgacgaagctgcttattagcctc
gtaaaacgtcaagatggcatgataaacaaggatcagctcatcaaagggtttgaatatgtt
ctctccgtcctggaggatactgtaaatgatgcccctagagcagcagagtttctaagtcgt
attcttgcacaagttatattggaaaacattgttggtctttctgcaattgggcgtttgata
tatgaaggtggagaagagcaagggagtcttgtagaaattgggcttgcagccgaagttgta
ggaggtatcttggagattgtcaaatcagtaaaaggtgattcaatattgagcgagatgcgt
tcaagctctaatctgcagcttgaaaacttcagacctccgggcgcaaaaaaatcttggaga
ttagataagttcctttag
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