KEGG   Primulina tabacum: 142526504
Entry
142526504         CDS       T11246                                 
Name
(RefSeq) DNA repair endonuclease UVH1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ptab  Primulina tabacum
Pathway
ptab03420  Nucleotide excision repair
ptab03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    142526504
   03460 Fanconi anemia pathway
    142526504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptab03032]
    142526504
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142526504
DNA replication proteins [BR:ptab03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    142526504
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     142526504
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 142526504
NCBI-ProteinID: XP_075487064
LinkDB
Position
15:27916016..27929931
AA seq 942 aa
MVQFHHNIIFDLLDEPSGGLVVLSAGLGLPKLISALLSLHDPAQGSLLLLSASSSQRSEI
ALHHPGTSEITSELSAHHRLSLYTSGGIFFITARILIVDLLTSRLPTTSVAGIILLNAHS
LSDTSTEAFIVRILRSSNRSLYVRAFSDSPQSMVSGFAKSERILKCLGLRKLHLWPRFQV
YVSQDLERNQPEVIDIRVPMSPHMLGIQKAVIEVMDGCLKEMRKTNKVDVEDLTVESGLF
KSFDEIVRRQLDPIWHTLGKRTKQLVSDLKTLRKLLDYLSRYDAVTYLKYLDSLRASESF
RSVWVFSESSFKIFELAKKRVYHFGRSDGRKRKLDNRNKDGDDSRASANNGVVLEKTLEA
PPKWKVLREILIEIQEETQKQATVGEELLVGADEGQNGIVLVACKDEHTCMQLQDFINKG
QHKVMLEEWEKYLLGKVELRALPKSNKNKQKTSKGFGILDGVIPSISGQRAEVTSISKQE
NDALLAAAHVISKEAKRDSNVEVDGVSEEHGRGRKTQSKKNKSLIDITDSELETVVQSED
HPSKSEDKTNVSHQLYGRESGTESLDKGVLRKHSKKLENTNEFPSVHFHALESDQVILDI
FQPSVIIFYHPSVAFVREIEIYKAENPSKKLKVYFLFYEDSTEVQKFEASVRRENGAFES
LIRQKSLMLIPVGQEDNFQGSNSSFEPQSLTAQNLVTRKAGGRKEAEKEMQVIVDMREFM
SSLPNVLHQKGIRIIPVTLEVGDYILSPLICVERKSVQDLFISFSSGRLYNQVEMMSRYY
KIPVLLIEFSQDKSFSFQSASDIGNDVTPTSIISKLSLLVLHFPRLRIVWSRSLHATAEI
FATLKANQDEPDEVKAIRVGVPSEEGIIGNDIRAENYNTSAVEFLRRLPGVTDSNYRSII
DGCNNLAELALLPLEKLTELMGGNKAAKILRDFLDAKFPTLL
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggttcaatttcaccataacataatcttcgacctactcgacgaacccagcggcggcctc
gtagtactctcggccggcctcggtctccccaaactaatctccgccctcttgagcctccac
gaccctgcccagggttccctcctcctcctctccgcctcttcttcccaaagatccgagata
gccctacatcatcccgggacatcggaaatcacctccgagctatccgcgcaccaccgcctc
tcgctttacacttccggtggaatcttcttcatcactgctaggattctcatcgtcgacttg
ctcacgtcccgtctccctaccacgtcagtcgcggggattattttgcttaatgcgcattcg
ctgtcggatacttcaactgaggcttttattgtgcggatattgcggtcttctaaccggtct
ctgtatgtcagggcattctctgattcacctcagtccatggtgtcagggttcgcaaaatcg
gagaggattctcaagtgccttggactccgaaaacttcatctgtggcctaggttccaggtg
tatgtttctcaagatttggaaaggaaccaaccggaggtgatagacatcagggttccaatg
tcacctcacatgcttgggattcagaaggctgttattgaggttatggatggatgtttgaaa
gagatgaggaagactaataaagttgacgtggaagatttgacggttgagagtggattgttc
aagtcattcgatgagattgttaggagacagttggatccgatatggcatacattaggaaag
agaacgaagcagttggtttctgatttgaagacactgagaaagctattggattatctttct
aggtatgatgcagtaacctacttaaagtatctggactcacttagggcctcagagagtttc
cgttctgtttgggtcttttctgagtctagtttcaagatttttgagcttgcaaagaagcgg
gtatatcattttggtaggtcagatggtaggaagagaaaactggacaacaggaacaaggat
ggagatgattctcgtgcatctgcaaataatggagtagttttggagaaaaccttggaggcg
ccaccaaagtggaaggtgttacgtgagattctcatagagatacaggaggaaacacagaag
caagctacggtaggggaagaattattagttggagccgacgagggtcagaatggaatagtt
ctagtggcatgcaaggatgaacacacatgcatgcagcttcaagacttcatcaacaagggc
cagcataaggtcatgctggaggaatgggagaaatacttgcttggtaaagtagaattacgg
gccttaccaaaaagtaacaaaaataaacaaaagacatccaaaggttttgggattcttgat
ggagttattccctctatttctggacaaagagctgaagtcactagcataagcaagcaagaa
aatgatgcattgctggctgcagctcatgttataagtaaagaagctaaaagggattctaat
gttgaagttgatggggtgagcgaagaacatggtagaggtaggaaaacacaaagcaagaag
aataaatcattgattgatataactgattctgaactggaaaccgttgttcagtctgaggat
catccttcaaagagtgaagacaagacaaatgtcagtcatcaactttatggtcgtgaatct
ggaactgaatctctggataaaggggttcttcgaaaacatagtaaaaaattagaaaatact
aatgagttcccatcagtgcatttccatgctctagagagtgatcaagttattctggatata
tttcaaccttctgtcataatattttaccaccctagcgtggcttttgtcagagaaattgaa
atttacaaagctgaaaatccttcaaaaaaattgaaagtgtactttctgttctatgaagat
tctactgaggtgcagaaatttgaggcaagtgtgcgtagagaaaatggggcatttgaatcc
ctaattagacagaaatctctgatgttaataccagttggtcaggaagataattttcaagga
tcaaattcttcctttgagccgcagtctcttactgcccaaaatctggtcaccagaaaagca
ggtggaagaaaggaagcagaaaaagaaatgcaggtcatagtggatatgagagaatttatg
agcagtctcccaaacgtactccaccaaaaaggcatccgcattattcctgtgactttggaa
gtgggagattacatactgtcaccattgatatgtgtagaacgtaaaagcgttcaagatctt
tttatcagtttttcatctggtagattatataaccaggtggagatgatgtcacgttattat
aagatacctgttctcctgatcgagttttcacaagataaaagtttttcatttcagtctgca
agtgatattggtaatgatgttacaccaactagtattatatccaagctgtccttgcttgtg
ctccattttcctcggctgcgcattgtttggtctcgcagtttacatgctactgcagagatt
tttgctacacttaaggcaaaccaggatgaaccagatgaagtcaaggcaatcagagttggt
gttccatcagaggagggtattattggaaacgatatcagagctgaaaattacaatacctca
gcagttgagttcctgagacggctaccaggggtgaccgattctaactacaggtcaataata
gatgggtgtaataacttggcagaacttgcacttcttcctctagaaaagctaaccgagtta
atggggggtaataaagcagcaaaaatcttgcgagactttctcgatgccaagtttcccacc
ttgctttaa

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