KEGG   Primulina tabacum: 142526514
Entry
142526514         CDS       T11246                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
ptab  Primulina tabacum
Pathway
ptab03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    142526514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptab04121]
    142526514
   03036 Chromosome and associated proteins [BR:ptab03036]
    142526514
Enzymes [BR:ptab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     142526514
Ubiquitin system [BR:ptab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    142526514
Chromosome and associated proteins [BR:ptab03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     142526514
    Noncanonical PRC1 (PRC1.1)
     142526514
    Noncanonical PRC1 (PRC1.3/1.5)
     142526514
    Noncanonical PRC1 (PRC1.6)
     142526514
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 Scramblase zf-UDP zf-RING_6 RAWUL zf-rbx1 zf-Nse zf-RING_10 zf-C3HC4_5 zf-RING_11
Other DBs
NCBI-GeneID: 142526514
NCBI-ProteinID: XP_075487084
LinkDB
Position
15:37162780..37167893
AA seq 447 aa
MPAQKRSLEATTPPPSPPPPLEEEKADDSLQSGENHIHEPAENSCDSDDFPDSSGGEKDE
FIIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
RRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEKARNKQIQASIAQTFRRQAEALGKK
RTSARATTATFVRRQGSYRNLRTRRNHRAIENQGSDEEEANGHDGSKDSSSADERSTEVK
SKRYKRWGGTRTSQTSSGVHADGGGDDNDSEANREVLGASAGLVGTTEILAWGRGGMRSN
TRYGVPNGAGGKISRNSRLSKLINRLQCANENNEALKISVMLVSLHEEKISSLKRPFLCC
SPTSSVKHLCQYVAQQTSLEASEIEILMVKDFHPVNNTSSLKKEPGLSNPCYNALELLNE
HQTLGIVHAHFTQQNLVLGYRKKEQML
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgcccgcacaaaagcgttcgctcgaagctaccactcctccgccttctcctccgccaccg
ctcgaggaagaaaaggccgatgattcgctccaaagcggcgagaatcacatccatgaacca
gctgaaaactcttgcgattccgatgactttccggactctagtggcggagagaaagacgaa
ttcattatcgtgaagttggcagaaatacgcaaagaagttcaatgtccaatatgtttaggt
atcatcaggaagacgagaacagtcatggagtgcttacatcgcttctgcagagagtgcatt
gacaaatccatgcgacttgggaacaatgaatgtcctgcttgccgcacacattgcgctagt
cgtcgttctctgagggatgatccaaattatgatgcccttattgctgctctttatccagac
attgataaatatgaagaagaggaactggctttccatgaagaggagaaagcccgaaataag
cagatccaagcttcaattgcccaaacttttcgtcgacaagcagaagctcttgggaagaaa
cggacatcagccagagctactacagctacgtttgttaggaggcaaggaagctatcgaaac
ttaagaactcggagaaatcaccgagctattgaaaatcaaggatctgatgaagaggaggct
aatggtcatgatggtagtaaggattcatcttctgctgatgagcgttctactgaagtcaaa
tcaaaacgatacaaaagatggggaggtactcgaacttcacagacatcttctggagtccat
gccgacggaggcggtgatgataatgattcagaagcaaaccgagaagtacttggtgcatct
gctggacttgttggcactacagaaattcttgcctggggtagaggtggcatgcgcagtaac
acccgatatggtgttcccaatggtgctggtggcaagatttctagaaatagcagactttca
aagctaatcaatcgtctccaatgtgcgaatgaaaataatgaagcattgaaaattagtgtc
atgcttgtttctctacatgaggagaaaatatccagcttgaagcgacctttcttgtgctgc
agccctacatcgtctgttaaacacttatgccagtatgttgctcagcaaacatctctggaa
gctagtgaaattgagatactgatggtaaaagatttccatcctgtcaacaacacttcaagt
ctcaaaaaagaacctggcctctcaaatccttgttacaatgcgttggaattgttgaacgag
catcaaaccttgggtattgttcatgcccattttactcagcaaaatctggttttaggatac
cggaaaaaggaacaaatgttgtag

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