Primulina tabacum: 142526835
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Entry
142526835 CDS
T11246
Name
(RefSeq) putative pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ptab Primulina tabacum
Pathway
ptab00040
Pentose and glucuronate interconversions
ptab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142526835
Enzymes [BR:
ptab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142526835
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
142526835
NCBI-ProteinID:
XP_075487570
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Position
2:complement(4610542..4614975)
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AA seq
480 aa
AA seq
DB search
MEVLTSSRCIVFVFLVGAFSCQVSALLNFTLPGQHPDPESVAQDVHRRVNASMSRRQMLS
YTTSDQSSTCFTGNPMDDCWRCDPNWQLNRQRLADCAIGFGQYALGGKGGRYYVVTDSSD
GDAVNPKPGTLRYAVIQTEPLWIVFPTNMLIHLSQELIFNSYKTLDGRGANVHITGGGCI
TLQYINNVIIHNIHIHHCYQSGETNVRSSPTHSGWRTLSDGDGISIFGSRDIWIDHCRLS
NCKDGLIDAVMGSTAITISNNIFSHHNEVMLLGHSDNYLPDSGMQVTIAFNHFGKRLIQR
MPRCRRGYIHVVNNDFTRWEMYAIGGSASPTINSQGNRYIASFDNNAKEVTKRLDTSDEE
WRDWNWRSEGDIMVNGAFFVASGQDVGVKYEKAYSVEPKSAADIDLLTLNAGVLRSRGNK
MSKWAGDSSGADFDSNSDGFDDYDDYSGSQKPCTNNSILTTSLTILTIFLFLHGTTTSIL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgctgacaagtagccggtgcattgtgtttgtatttcttgtgggtgcattttct
tgccaggtttcagcattgctcaatttcactctccctgggcagcacccggaccctgaatct
gttgctcaagatgttcacagaagagtcaatgcatcaatgtcaagaagacaaatgctatcc
tacaccaccagtgaccagtcatccacttgcttcactggcaatcccatggatgactgctgg
cgttgcgaccccaattggcaactcaaccgtcaaaggcttgcagattgcgccattgggttt
ggtcaatatgcccttggtggcaaaggggggcgttactatgtcgtgacagattcatcagac
ggcgatgccgtcaacccaaagccgggaacccttcgatatgcagtcattcaaactgaacct
ctgtggattgtttttcccaccaatatgctcattcatctctcccaagagctgattttcaac
tcctataagactctggacggccggggagcaaacgtacatataaccgggggaggatgcata
acattgcaatatataaacaatgtcatcattcataatatacatatacaccattgctaccaa
tcgggggagacaaatgttagatcgagcccaacacactctgggtggcgtacactatcagac
ggtgatgggatctccatatttggatcaagggacatttggattgatcattgcaggttgtca
aattgtaaagatggcttgattgatgctgtcatgggatccactgcaatcaccatatctaac
aacattttctcacaccataatgaggtcatgttattaggccacagcgacaattatttgccc
gattctgggatgcaagtgaccatagcttttaaccattttggtaaaagactaatacagagg
atgccaaggtgtagaaggggatacatacatgtggtaaacaatgactttacaaggtgggaa
atgtatgcgattggaggtagtgcgagtcctaccatcaatagccaaggaaaccgctacatt
gcctcttttgataacaatgcaaaggaggttacgaaacggttggatacttcggatgaagaa
tggagggattggaattggaggagtgaaggagatataatggtgaatggagcattcttcgtg
gcgtcaggacaagatgtaggggtgaaatatgagaaggcttatagtgtggagcccaaatct
gctgcagatattgacttgctcacgctcaacgctggtgtccttaggagcaggggtaacaag
atgtctaagtgggcaggagatagctctggagctgattttgattcaaattccgatggcttt
gacgactatgatgactactcggggagccagaagccttgcactaataactctatcctgacc
acttctctaacgatcttgacaatctttttatttctacatggcactacgacttccattcta
tag
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