Primulina tabacum: 142526914
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Entry
142526914 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142526914 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142526914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142526914
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
142526914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
142526914
NCBI-ProteinID:
XP_075487692
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All DBs
Position
15:35751100..35755345
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AA seq
313 aa
AA seq
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MVSLAPSLNLMATPFEAGSSSSAANKDRRMQSAEQLVLDLCNPDLRENALHELSKKRELF
QDLAPLLWNSFGTVAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRML
FLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLR
TMEMGSELSKTVATFIVQKILLDDIGLEYICTTAERFYAVGRVLGNMVTVQAEQPSPRLL
KHIIRCYLRLSENLRACEALRSCLPDLLRDATFNSCLREDPTTRRWLQQLIYNVQAARAP
MQPGTGFEHMMVN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggtgagccttgcaccgtcgttaaacttgatggccaccccctttgaagctggtagcagc
tcttccgcggccaacaaggaccggaggatgcaatcggctgaacagctggttctcgatctt
tgcaatcccgatcttcgggaaaatgcactccatgaactctccaagaagagggaactgttc
caagatttggctccattgttgtggaattccttcggtacagttgccgctcttttgcaggag
atagtctccatttatcctgttttatcacctccaaatttaactccggcacaatcaaacaga
gtttgcaatgcactcgctctccttcagtgcgtggcctcgcatccggacaccagaatgctg
ttccttaatgctcatattcctctttacttgtacccttttctcaacacaaccagcaaatca
aggccctttgagtacttgaggctaaccagtctcggcgtcatcggtgctttggtgaaggtt
gatgacactgaagttatcagtttccttctctctactgagatcattcccctatgcctgcgc
acaatggagatggggagtgaattgtcaaaaacagtagcaacattcattgtgcagaagatt
ttacttgatgatattggcttagagtacatatgcactacagccgagcggttttatgctgta
ggtagagtacttggaaacatggttaccgtgcaagctgaacaaccttctcctcggctgttg
aagcacataatcagatgctatcttcggttgtcggaaaatctgagagcttgtgaagcactg
cgaagctgcctacctgatctgcttagagacgcgacatttaatagctgccttcgtgaagat
ccaactaccagaaggtggttacaacagttgatttacaatgttcaagctgctcgggctcca
atgcaaccaggaactggattcgagcatatgatggtcaattaa
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