KEGG   Primulina tabacum: 142526965
Entry
142526965         CDS       T11246                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like isoform X1
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
ptab  Primulina tabacum
Pathway
ptab03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    142526965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptab03021]
    142526965
Enzymes [BR:ptab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     142526965
Transcription machinery [BR:ptab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     142526965
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 142526965
NCBI-ProteinID: XP_075487775
LinkDB
Position
15:complement(1099434..1120729)
AA seq 1207 aa
MGGSDFPKAGPSGANEKFSNGTTRMDIDDDMDFELSDSDDGDHVGSSFQELGEGSLKTFC
KKASTTFYYQYGLISHQINSYNDFFKYGIQQLFDSIGEIVISQGYDPSKRRDDGWRQASL
KFGKVTLEKPIFWTGDKFSADGGKDYLNLLPRHARLQNMTYSSKIRIDTHLEVFTENLAS
SDKFKTGVQQEVEKTVVSVHQSDILFGSLPVMVKSDLCNEKGTEKMDCEFDHGGYFIIKG
AEKTFIAQEQMCLKRLWIAKDPNWSIAYRSVAKRRKVHVKLVPKVEHISGGEKILTVYFM
ATEVPIWILFFALGVSNDLEVVKLIDLDIEDCRVANVLVASIHVADKNYEGFRKADSAIN
HIKKLMQGCKFPPTESVEECFKNYLFPNLKSLGQKARFLAYMVKCVLEAYMGLRKVDSRD
DFRNKRLELASELLERELRVHMKHAERRMVKAMQRDLYGDREIQSIEHYLDTSIITNGLS
RAFSTGAWSHPYKRMERISGVVATLRRTNPLQATCDMRKTRQQVSYTGRAGDARYPHPSH
WGKICFLSTPDGENCGLVKNLASLGLVSIHVLEKNGLLRKLRQYGMEILVDDTSSLLEGK
QKVLLDGDWVGGVENSASFVAKLRRKRRRMEVPHLVEIKRDEHHSEVRIFADSGRIFRPL
LVVRNLKKIKGVKGDYTFQTLLDNGIIELIRPEEEEDCQTAWGIRYLFTNEKSRQPVYTH
CELDCSFLEGLSCGIIPFNNHDHAKRVLYQSEKHSQQAIGFSTTNPNARVDTNSHQLYYP
QRPLFRTMLSDCLGKSSYSHQQRGMIPHPEFSNGQSAIVSVNVHLGYNQEDSIVMNRSSL
ERGMFRSEHIRSYKAEVESSEGLGKKLKPEDGISFGKTQSKIGRVDSLDDDGLPFVGANL
QTGDIIIGKHSESGVDHSIKLRHTERGMVHKVVLSANDDGKNYAVVSLGQVRSPCLGDKF
SSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGA
LKYATPFSTPSVEDITAQLHRLGFSRWGHERVYDGRTGEAVRSLIFMCPTFYQRLTHMAE
DKVKFRNTGLVHPLTRQPVADRKRFGGIKFGEMERDCLLAHGAAANLHERLFTLSDSSQI
HICRSCKNVANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPYGAKLHCQELFSMGISL
KLNTELC
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgggtggatcggattttccaaaagctggacctagtggcgccaatgagaagttttccaat
ggcaccaccagaatggatattgacgatgatatggactttgagctttctgattctgatgac
ggtgatcatgtgggcagttcttttcaagaattaggtgaagggtcgctgaaaactttctgc
aagaaggcttcgaccaccttttattatcagtatgggctaattagtcaccaaattaattca
tataacgacttttttaaatatggtatacaacaattgtttgactctattggtgagattgtt
atctcgcaagggtatgatccatcgaaaaggagagatgatggttggaggcaggcatctctc
aaatttgggaaggttacccttgagaagcctatattttggaccggcgataagttttcagcc
gatggtgggaaggattatttaaatttgttgccccggcatgcacggcttcagaatatgacc
tactcatccaagatcagaatcgatactcatcttgaggtttttaccgaaaatcttgctagc
agtgacaagttcaagactggtgtacaacaagaagttgaaaagacggtggtaagtgtgcat
cagagtgacattctatttggcagcctcccggtaatggtgaaatcagatttgtgcaatgag
aaaggaactgagaaaatggattgtgaatttgaccatggaggatattttattattaagggt
gctgagaagactttcattgcacaggagcaaatgtgtctaaaaagactgtggatagcaaaa
gatccgaattggtcaatcgcatatcgctcagttgccaagcgaagaaaagttcacgtaaag
ttagttccaaaagtggagcacatcagtggaggagagaagatccttacagtttactttatg
gcaactgaagttccaatctggattctgttctttgccttgggtgtttcaaatgacctagag
gttgtaaagttgatagatctggacattgaagactgcagggttgcaaatgtacttgttgca
tcgattcatgttgctgataaaaattatgagggtttccgtaaggcggacagtgcaataaat
catattaagaaactcatgcagggttgcaaattcccacctacagagtccgtggaagaatgc
tttaaaaattatctctttcctaacctcaaaagcttggggcagaaggctcggtttctggca
tacatggtcaagtgtgtgttagaagcttacatgggacttcgcaaagttgacagcagggat
gatttcaggaacaagaggttggagttggctagtgagctacttgagagagaattgagagtt
cacatgaaacatgctgagaggcgcatggtgaaagccatgcaaagggatctttatggagat
cgggagatacagtcaattgaacactacttggatacttcaatcatcacgaacggtctttcc
agggctttttctactggagcttggtcacatccttacaagaggatggagagaatttctggt
gttgtggctactctaaggcgaacaaatcctttgcaagcgacttgtgatatgaggaaaaca
cgccagcaggtttcatacacagggagggctggtgatgctagatacccccacccatctcac
tggggtaagatttgcttcctttctacacctgacggagaaaattgtggactagttaagaat
ctagcaagcttaggtcttgtcagcatccacgtattggaaaagaatggtcttctccgaaaa
ttacgccagtatggaatggaaattttggttgacgatacttcaagtttgctcgaagggaag
caaaaggttcttttagatggagattgggttggaggggttgaaaattctgcgtcatttgtt
gctaagctaagacgtaaacgtcgcaggatggaagtgcctcatttggttgagattaagaga
gacgagcatcattctgaagtgcgcatatttgctgattctggaaggatattccggcctctt
ttagttgttcgaaatttaaagaagattaaaggagtaaaaggagattatacatttcagact
ctactagataatggaataatagagttaataagaccagaagaagaggaagattgccagact
gcatggggaattagataccttttcaccaatgaaaaatctaggcaacctgtatatacacac
tgtgagttagattgttcgtttttggaaggcttaagttgcggaatcattccgttcaacaac
cacgatcacgcgaagagagtactctaccagtccgagaagcattcccagcaagcaattgga
ttttctacgacaaacccgaatgccagagtcgatactaattctcatcagctgtattacccc
cagaggccacttttccggacgatgctttctgattgtctaggaaaatcatcatattctcat
cagcaaagggggatgatcccacaccccgagttctctaatggtcagtccgcgatcgtgtct
gttaatgtccatctgggatacaaccaagaggactcgattgtgatgaatcgttcatccctg
gagcgtggaatgtttcgatctgaacacattagaagctataaggcggaggttgagagctcc
gaaggattagggaaaaagcttaagcctgaggacggtataagctttgggaaaacacagagc
aaaattggtcgggtagacagccttgacgatgatggccttcccttcgttggtgccaacctc
caaacaggcgacataatcataggaaagcattctgaatcaggggtcgatcacagcattaag
ttgcggcacactgaaagagggatggttcacaaagtcgtgctttctgctaatgatgatgga
aagaactatgccgttgtatctctaggacaggttcgttctccatgtcttggcgacaagttc
tcgagtatgcatggacaaaagggcgttcttggctttctggagtctcaagaaaatttccct
tttacgaaacaaggaatagtcccagacattgtgataaatcctcacgcatttccctcccga
caaactcctggtcaacttttagaggccgccttaggcaaagggattgccttggggggtgca
ctaaaatatgccaccccattttcaacaccatcggttgaagatatcacagctcaacttcat
aggcttggattttcaagatgggggcatgaaagagtttacgatggtcggactggagaagca
gttcgttccctgatttttatgtgcccaactttctaccagcgcctcactcacatggccgag
gataaagtgaaattcaggaatacagggctagtccatccacttacccgccagccagttgca
gataggaagcgatttggcgggatcaaattcggtgagatggaacgcgactgtctattagcc
cacggtgcagctgcaaatttacacgagcgcctcttcaccctgagtgattcctctcagatt
cacatctgccgcagctgtaagaacgtggccaacgtaattcagcgcccagtttttggtggc
cggaagattcgtggtccctattgtcggttctgtgagtcggtggaagatgtggtgagggtc
aacgtcccatacggagcgaagcttcactgtcaggagctgttcagtatgggaatttctctc
aagttaaataccgagttgtgctga

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