Primulina tabacum: 142527130
Help
Entry
142527130 CDS
T11246
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142527130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142527130
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
142527130
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
HECT type E3
142527130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
YbfN
Motif
Other DBs
NCBI-GeneID:
142527130
NCBI-ProteinID:
XP_075487964
LinkDB
All DBs
Position
15:complement(32313932..32335008)
Genome browser
AA seq
1028 aa
AA seq
DB search
MFFSGDPSSRKRVDLGGRSSKERDRQKVVEQTRLERNRRQWLRQQNSAALKIQKCFRGRK
VVNAERSKVREKFFMTYGEGCQVVNRQCFGPDSNYLPQLLFFFNPNHVADLTVLVKTCRL
LCEFGGDRVEEVVRLCAGTDYSLKRGLVEYRVKKLTFACVSAIYVNRNQLLWALEKSDSP
AYAFLEAVILLADRRLPWSCNLVRYLVQRKIYSMLRDIILVGKKKVQVCNEIISSLEHVL
AICVSHGGLDSCTCPSSDPRHSFSSQILTIPFLWQLFPNLKEIFAAPGLSENYVHQMALC
VRDYNNVLPPDISTDSPSYACLLENLLEAAAFTVTQPGSFTWAIYFASVATILLQELPLV
QTSNQGGKDSAMAEIEMHVDDEFVEEVLNKELRQNIFSAVGPRFLLQLTNVLLGWISISS
GSYNGRPNDKEVAAIGAACAFLLATFNILPLEKYMTVLAYRTELVPTIWNFMKRCHENEM
WSSLSQQPANLPPDKPVWLLSLAVFCPVYKYMLTIVDNEEFYEQQKPLSLMDIRFLIVIL
KQDLWHILWQNSKETSNISKSADGAYALKRHSVDALQHRVSVVVSELLSQLQDWNNRREF
TSPRDFNADGANETFMSQAMTENTKAYDILKQAPFLVPFTSRAKIFNSQLAAMKERNNAH
AIFTRNRFKIRRNNILEDAFSQLNALAEEDLRGVIRITFVNEFGVEEAGIDGGGIFKDFM
ENISQAAFDIQYGLFKETVDHLLYPNPGSGMVHEQHLLYFHFLGTVLAKAMFEGILVDIP
FATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYQGDISELELYFVIVNDEYGKQTED
ELLPGGKNLRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHEL
QLLISGSMDGCDVDDLRVHTNYTGGYHEDHYVIKMFWEVIHNLSLADQRKFLKFATGCSR
GPFLGFKYLEPTFCIQRTTGNASEEALERLPTAATCMNLLKLPPYRSKQLMEQKLLYAIS
SDAGFDLS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctcgggggatccgtcgagccggaaacgggtggatttaggcggtcggagttct
aaagagagagaccgccaaaaggttgtggagcagacgcgattggagcgcaatcgacgccag
tggttgcgtcagcagaattctgctgctcttaaaattcagaaatgcttcagaggaagaaag
gtggttaatgctgaacgctccaaagtgcgtgagaagtttttcatgacatatggagagggt
tgtcaagttgtgaataggcagtgttttggcccagattccaattatcttccccagcttctt
ttcttctttaatccaaaccatgttgctgatcttactgttctcgtcaagacatgcagatta
ctctgtgaatttggtggagatagagtagaggaagtagtgagactctgcgcaggcacagac
tactctttgaagcgtggcctggtggagtaccgggtgaagaaactcacttttgcctgcgtt
tcggcaatctatgtaaacaggaatcagttactttgggcacttgagaagtctgatagccca
gcatacgccttcctagaggcggtaattctcttggctgatcgaaggcttccttggtcttgc
aacttagtccggtatttggtgcagagaaagatatactccatgctcagagacataatccta
gtggggaagaagaaagttcaagtttgtaatgaaattatctcttcactggagcatgttctt
gcaatttgtgtttcccatgggggtctagattcttgtacttgtccatctagtgatccaaga
cacagtttctcatcccagattctgacaatccctttcttgtggcagctgtttccaaatctg
aaagagatttttgctgcgccgggattgagtgaaaattatgtccatcagatggcattatgt
gtgagagattataacaatgtccttcctcctgacatatcaacagattctcccagttatgcc
tgcctattagaaaatctgttggaagctgctgcgtttactgtcactcagcctggttcgttt
acttgggctatatattttgcatctgttgccacaattttgttgcaagagctacctcttgtc
caaacttcaaatcaaggaggcaaagattctgcaatggctgaaattgaaatgcatgttgat
gatgaatttgtggaagaagtcttaaataaggagctgcgacaaaatattttcagtgcagta
ggtcctcgttttcttctacagttgacaaatgtgctgttggggtggatctcaatttcaagt
ggctcatataatggcagacctaatgataaagaggtggctgctattggcgcagcttgtgct
tttcttcttgcgacattcaacattttgcccctggagaaatatatgactgtgctagcatat
aggacagaacttgttcccactatttggaattttatgaagaggtgccatgagaatgaaatg
tggtcatccttgtctcagcagccagctaatctgcccccagataagcctgtttggctatta
tctcttgctgtattttgtcccgtttataagtatatgctaactattgtagataatgaagaa
ttttacgaacaacagaagccactctcccttatggacataagattcttgattgttatctta
aaacaggatttgtggcacatcctttggcaaaattcaaaggaaacttcgaatatctcaaag
tctgcagatggtgcttatgctttgaagaggcattctgttgatgcgcttcagcacagggtt
tctgtggttgtctctgagctcctatcgcagttgcaagactggaataataggcgagaattt
acctcccccagggatttcaatgctgacggtgccaatgaaacatttatgtctcaggcaatg
acggagaatacaaaagcttatgacatactaaaacaagctccatttttagtgccatttact
agcagagctaagatatttaattcacaactagcagccatgaaagaaaggaacaacgcccat
gctatttttacacggaatagattcaaaataagaagaaacaatattttggaagatgctttt
agtcaattaaatgcgttagctgaagaagatctccgaggagtgattcgtataacttttgtt
aatgaatttggagttgaggaggccggtatagatggtggaggaattttcaaagatttcatg
gaaaatattagtcaagctgcttttgatatccagtatggactctttaaggaaaccgtggat
catctcctttatcccaaccctggatctggaatggtgcatgaacagcatcttctgtatttt
cactttcttggaactgttctcgctaaggcaatgttcgagggaatcttggtcgacatacca
tttgctacattcttcttgagcaaattgaagcagaagtataactacttgaatgacttaccc
tcgttggatccagaattatatcgccatctaatttttctcaagcattatcaaggtgatatt
tccgagttggaattgtattttgttattgttaatgatgaatatggaaagcaaacagaagac
gagctacttccaggaggaaagaacttacgtgtcacaaatgagaacgttattacattcatt
cacttggttgccaaccacagactaaattttcagatacgtcaacagagttcacattttttg
agaggttttcaacagctgatccaaaaagattggattgatatgttcaatgagcatgaactt
cagcttttaatttccggatcaatggatggttgtgatgttgatgatcttcgagttcatact
aattatacaggtggctatcacgaggatcactatgtgattaaaatgttctgggaagttatc
cacaaccttagtctagcagatcagaggaagtttttgaaatttgccactggttgttcgcgg
gggccttttcttggattcaagtatttggagcctactttctgcatacagaggactactggg
aatgcatctgaagaagctcttgaacggttgccaacagcggccacatgcatgaatcttttg
aagcttccaccataccgaagcaaacagcttatggagcagaaattgttgtatgccataagt
tctgatgctggttttgatttgagttga
DBGET
integrated database retrieval system
