Primulina tabacum: 142527495
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Entry
142527495 CDS
T11246
Name
(RefSeq) prolycopene isomerase, chloroplastic-like
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
ptab Primulina tabacum
Pathway
ptab00906
Carotenoid biosynthesis
ptab01100
Metabolic pathways
ptab01110
Biosynthesis of secondary metabolites
Module
ptab_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
142527495
Enzymes [BR:
ptab01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
142527495
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
GDI
FAD_oxidored
Thi4
HI0933_like
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
142527495
NCBI-ProteinID:
XP_075488432
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Position
2:complement(5486142..5491358)
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AA seq
615 aa
AA seq
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MDILSFGHPISQSSISQWRTKSVFRREPENQKHRIVCFDSLKRQNFNDYQFLDPGFVVGR
AKRGKRSNRYRLKSVIDAEKTVESEGRKTEGDLKSYYYDAIVIGSGIGGLVAATQLAVRG
AKVLVLEKYVIPGGSSGFYQRDGFTFDVGSSVMFGFSDKGNLNLITQALEAVGCRMQSIP
DPTTVHFHLPNGFSIQVHRHYSEFISELVAKFPHEEEGILKFYGECWKIFNALNSLELKS
LEEPIYLFGQFFKKPLECLTLAYYLPQNTGDIARKYIKDPELLSFIDTECFIVSTVNAKR
TPMINASMVLCDRHFGGINYPVGGIGEIAKTLAKGLINHGSDIIYRANTTNIVIENGQAV
GVKLSDGREFYAKTIISNATRWDTFEKLLKKEVLPKEEEQFRKAYVKAPSFLSIHLGVKA
EVLPPNTDCHHFVLEDDWKYLEDPYGSIFLSIPTALDSSLAPEGKHILHIFTTSSIEDWE
GLSRTDYETKKELVAEKIISRLEKKLFPALQSSIVFKKVGTPKTHRRYLARDSGTYGPMP
RNTPKGLLGMPFNTTAIKGLYCVGDSCFPGQGVISVAFSGVMCAHRVAADLGFEKKNAVL
DAALLRLLGWLRTLA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctaagttttgggcatcccatatcccagtcgtccatcagtcaatggaggact
aaatctgttttcagacgagagcccgagaatcaaaagcatcgaattgtttgttttgattct
ttaaaacggcaaaatttcaacgactaccagtttcttgatccgggatttgtcgttggcagg
gctaaacgtggaaaaagaagcaatcgttacaggttgaaatcagtgattgatgcagaaaaa
acggtggaaagtgagggtcgaaagacagaaggtgatttgaaaagttattactatgatgcc
atcgttataggttctgggattggaggattggtggcggcaacgcagctggcagtgagaggg
gccaaggtgttggttctggagaagtatgtgatcccaggaggaagctctgggttttaccaa
agggatggattcacatttgatgttggatcatctgttatgttcggtttcagcgataaggga
aatctaaatttgattacgcaagcactagaagcagttggatgtaggatgcaatccatacca
gacccaacaacggttcattttcatttacctaatggtttttctatccaagtgcataggcat
tatagtgaatttatctcagaacttgtcgctaaatttccccacgaggaagaaggaattctc
aaattctatggcgaatgctggaagatctttaatgccttgaactcgctggagttgaaatcc
ttagaggagcctatctatctgtttggacaatttttcaagaagcctcttgaatgcttgact
ctggcctactatctgcctcagaacacaggtgatatagctcggaagtatattaaggatcct
gaattgctctcctttattgatactgagtgttttatagtgagcacagtcaatgctaaacga
acacctatgatcaatgcaagcatggttttatgtgatagacattttgggggaattaactat
cctgttggtggaattggggaaatcgcaaagacattggcaaaaggtttgattaatcacggg
agcgatataatctacagggcaaacacaaccaacattgtgatcgaaaatggacaagcagtt
ggggttaagttatccgatggaagggaattctatgctaaaaccataatttcaaatgccact
agatgggatacatttgaaaagctcttgaaaaaggaggttttgcccaaagaagaagaacaa
tttcgaaaggcctatgttaaagcaccatcttttctctctattcacttgggggttaaagcg
gaagttttgccaccaaatacagattgccaccattttgtcctcgaggatgattggaaatat
ttagaagatccttatggaagtatattcttgagcattccaacagctcttgactcgtcatta
gctccagaaggaaagcacatccttcacatttttacaacttcttccattgaggactgggag
ggtctctctcgaacagattatgaaaccaagaaggaacttgtggcagaaaagataattagc
aggcttgagaagaaattattccctgcacttcagtcatctattgttttcaagaaggtgggg
accccaaagacacataggcggtacctggctcgtgatagtggtacctacggccccatgccc
cgcaataccccaaaaggcttattaggaatgccgttcaatacaactgctataaagggcttg
tattgtgtgggagacagttgctttccagggcaaggtgttatatctgttgccttttcagga
gttatgtgtgcacacagagtagcggctgatttaggttttgaaaagaaaaatgctgttctc
gatgctgctcttcttcggctacttggttggttgagaactctggcataa
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