Primulina tabacum: 142527526
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Entry
142527526 CDS
T11246
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ptab Primulina tabacum
Pathway
ptab03018
RNA degradation
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142527526
09123 Folding, sorting and degradation
03018 RNA degradation
142527526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142527526
03041 Spliceosome [BR:
ptab03041
]
142527526
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142527526
mRNA degradation factors
5'-3' decay
Lsm complex
142527526
Spliceosome [BR:
ptab03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
142527526
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
142527526
NCBI-ProteinID:
XP_075488470
LinkDB
All DBs
Position
15:complement(27930217..27937827)
Genome browser
AA seq
90 aa
AA seq
DB search
MSGAAEKASTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
QLKNKYGDAFIRGNNVLYISTSKRTLAEGA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagcagcggagaaagcatcaactactaaaactccagctgatttcctcaaatct
atacgtgggcgacctgttgtggtcaaattaaattcaggggttgattatcgaggtattctt
gcatgtttggatggatatatgaacattgccatggaacagacagaggaatacgtcaatggt
caattgaaaaacaaatatggggatgcctttattcgagggaacaacgtactctatataagc
acatcgaagagaaccctggcagaaggggcttaa
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