Primulina tabacum: 142527860
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Entry
142527860 CDS
T11246
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptab Primulina tabacum
Pathway
ptab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142527860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptab03021
]
142527860
03036 Chromosome and associated proteins [BR:
ptab03036
]
142527860
Transcription machinery [BR:
ptab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142527860
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
142527860
PBAF complex
142527860
GBAF(ncBAF) complex
142527860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
142527860
NCBI-ProteinID:
XP_075488951
LinkDB
All DBs
Position
15:complement(4558427..4564362)
Genome browser
AA seq
918 aa
AA seq
DB search
MEEKRRDSTGTPPTAAIDGYNLISEPLTSSRRRGGAQKRKSAPINSGFGGTDPQATSSKR
QAREKTPVVPFPPIHLNGPCTRARVQPNNGTSLSLDASDFKVESEAKAEELRRVSENWEE
LEAEIEAEYEAIISRDSNAHVVPIHAGWFSWNKIHTLEERMMPSFFSGKSESRTPEIYME
IRNWIMKKFHFNPNSQIELEQLSELTVGDLDARQEVMEFLDYWGLINYHPFPRNEPVATV
TVDDDEARKKDSLVEKLFQFETVESWTPVVTKTNTEMPSMSSGLVPDSVIAEELNKSEGP
SVGYHCNSCSTDCSRKRYHCQKQADFDLCAECFNNGKFGSDMSVSDFILMESAEAGGVSG
GKWTDQETLLLLEAIELFRDNWSEIAEHVATKTKAQCILHFVQMPIGDVFFNSDDENDVI
PKEIGLPVSTTTENSSLKADHDTDTDVKDVTEKTENEGDATDNRASSSPMEITKPEEVDD
SDKSLEFMENFTQKALKDAFEAVGSLSSPGDKLSFAEAGNPVMALAAFLVRLVEPNIASA
SVHSFLKALSAKHPSEQLAVRHCLPMEDPPDEKKKLADSEGAATETVEDEIEKDGNEHVE
KQNEETPDSAVQGISIQDDDKEENKESSSEEHKEKKDASSEQKLVASTSSDKSEFPRKQS
LKDAEASGVSGSHTHLNFNHVKESDNGGSAMELCQSEAPLKDKKMTSNSEKEDTKPFFMS
DSAMEKERRKGDKEAKEHDGKKKNSRVTKNDLDINKLKRAAVTALSAAAVKSKLLADEEE
SQIRQLAILLVERQLHKLETKLALFGDLENVVLRVKEQLDRSKQRLFQERAQIIATRLGM
PASARPTSHHLPSNRAPAPASNFPNQGLRPLMGTNTLRPPISRPTMAPNPASSTFTHINA
AGSSMQPNSVKFSSFGAK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagcgaagagattccaccggaaccccgccgacggcggccatcgatggttat
aatctgatttcggagcctttgacgtcgtctcggaggagaggtggtgcacaaaaacggaaa
tcggcgccaatcaatagcggcttcggtggcacagatcctcaagcgacgtcctctaagaga
caggctagggaaaagacgcccgtggtgccttttcctccgatccaccttaatggaccttgc
actagggcacgagttcagcctaacaatggtactagtttatctctggatgcgtcggatttt
aaggtcgaatcggaggcgaaggcggaggagttgaggagagttagtgaaaattgggaggag
ttggaggcagagattgaggccgaatacgaagccattatatcgagagactcgaatgcccat
gtggtgcctattcatgctggttggttttcttggaacaaaattcatactctggaggagagg
atgatgccttctttcttcagtgggaaatctgagagtaggactccagaaatatacatggag
atacgcaattggataatgaagaagtttcattttaatccaaattctcaaattgagttggaa
caactttccgagctcacagttggagatttggatgctaggcaagaggtgatggagtttcta
gactactggggtctgatcaattatcatccattcccaaggaatgaacctgttgctactgtt
actgttgatgatgatgaagcaagaaaaaaggactctttggttgaaaaactatttcagttt
gaaacagtggaatcatggactcctgttgttactaagacaaatacggagatgccttccatg
tcttctggattggtgcccgattctgtcattgctgaagaactgaataagtctgagggtcct
tctgtcggataccattgcaattcttgttcaacagattgttcccggaaacgttatcattgc
cagaagcaggcagattttgatttatgtgctgaatgcttcaacaatggaaagtttggctcg
gatatgtccgtgtcagatttcattctcatggaatcagctgaagccggtggtgttagtgga
gggaaatggacagatcaagagactcttttacttcttgaagcaatagagttgttcagagat
aattggagtgagatcgctgagcatgtggccacaaaaacaaaagctcagtgtatactgcac
tttgtccaaatgccgattggagatgtgtttttcaatagtgatgatgaaaacgatgtgatt
cctaaagaaattggattaccagtttccaccactaccgaaaattcatcgctgaaagctgat
cacgacacagatacggatgttaaagatgtcactgagaaaacagaaaatgagggtgatgcc
acagacaaccgggcctcatccagcccaatggaaatcacaaaaccagaagaagttgatgat
tcagataagagccttgaatttatggaaaactttacgcagaaagccttgaaggacgcattt
gaagctgtgggttctctttcttcaccaggggataaactatcatttgctgaggcgggtaat
ccagtgatggcattggcagcatttctagtgcgattggtggaacctaatattgcaagtgca
tcagttcatagcttcttaaaagctttatctgccaaacatcccagcgaacaactcgctgtg
agacactgtttacctatggaagacccaccagatgagaagaaaaagctggcggactccgaa
ggcgctgctactgaaactgttgaggatgaaattgagaaagacgggaatgaacatgttgaa
aagcagaatgaggaaacacctgattcagctgttcagggtatcagcattcaagatgatgac
aaggaagaaaacaaggaatctagttctgaggaacataaagaaaaaaaggatgcttcctct
gaacagaaactcgttgcttctaccagtagtgacaaatctgaatttccaaggaagcagtct
ctaaaagatgctgaagcatcaggtgtttcggggtcacatacccaccttaattttaatcat
gtaaaagaatcagataatggaggttcagctatggagttgtgtcagtctgaagctcctctg
aaagataaaaaaatgacatctaactcagaaaaggaagatactaagcctttttttatgtca
gattcagcaatggaaaaagagagaagaaaaggtgataaagaagccaaagagcatgatggt
aaaaagaagaattcccgggttactaaaaatgatcttgatatcaacaaattaaagcgtgct
gcagtgactgccctttcagctgcagcagtaaaatcaaagcttctagcggatgaagaggaa
agccaaattcgtcagcttgctatattactggtagaaagacagttgcacaaactcgaaaca
aaattggctctctttggtgacttggaaaatgtggttttgcgtgttaaagaacagttggat
aggtcaaaacagaggcttttccaagagagagcacagattattgcgacacgacttgggatg
ccagcatctgctcggcctacttcgcaccatttaccttccaacagagcaccagcaccagca
tctaattttccgaaccagggattaagacccttgatgggaacgaacaccctaagaccacct
atttcacgaccaacaatggctccaaatcctgcttcaagcactttcacgcacataaatgct
gcaggaagttcgatgcaacccaattcagttaagttttcttcatttggcgcaaagtag
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