Primulina tabacum: 142528279
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Entry
142528279 CDS
T11246
Name
(RefSeq) LOW QUALITY PROTEIN: oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ptab
Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142528279
03041 Spliceosome [BR:
ptab03041
]
142528279
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
142528279
Spliceosome [BR:
ptab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
142528279
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
142528279
NCBI-ProteinID:
XP_075489442
LinkDB
All DBs
Position
2:complement(6311390..6317179)
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AA seq
406 aa
AA seq
DB search
MHQQRLKQQQVLMQQSLYHPGLLAQPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
LLQEVFANTGPLEGCKLIRKDKSSYGFVDYLDRRSAALAIVTLNGRQLFGQPIKVNWAYA
SSQREDTSNQFNIFVGDLSPEVTDATLFACFAVYPSCSDARVMWDQKTGRSRGFGFVSFR
NQQDAQSSINDLNGKWLGSRQIRCNWATKGAGQGDDQQSSDLKTIVELTNGTSEDGQEKM
YEDTPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGVGAIEDIRVQRDKGFGFIRYSSHA
EAARAIQMGNARILFGKPIKCSWGSKPTPPGTTSTPLPPPAATHMPGFTAADLAAYERQL
ALSSRMMGGAQALIHPQGQRLAAATQPIYDTMYSSISTSQQPMFYQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcagaggttgaagcaacagcaagtgctaatgcagcaatctctttatcatccg
ggtctccttgcccagcctcagattgagcctatcttgagtggaaatttgccccccggattt
gattcaagtacatgccgtagtgtgtatgttggaaacatccacccacaagttacagaacca
cttcttcaagaggtttttgctaatactggtcctcttgaaggttgcaagctcattcgcaaa
gataagtcatcatatggctttgtggattaccttgatcgtcgatcagccgcccttgctatt
gtgactttgaatgggaggcaattgtttggtcaacctattaaagttaactgggcatatgct
agttcgcagagagaggacacatcaaatcaattcaatatttttgtcggtgatcttagccca
gaggttacggatgctaccttatttgcatgtttcgctgtctatcctagttgttcagatgca
agggtcatgtgggatcagaagactggtcgctcaaggggcttcggatttgtttcttttcgt
aatcagcaggacgctcaaagttcaataaatgacttgaatgggaagtggcttggaagtaga
caaatccgctgcaactgggccacaaaaggtgctggtcagggtgatgaccagcagagttcc
gatttaaaaaccatcgtggaactaacaaatggaacatcagaagatggtcaagaaaagatg
tatgaagatactccagaaaataatccacagtataccactgtatatgttggcaatcttgct
cctgaagtgacctctgttgatctacaccgtcatttccatgcacttggagttggagcaatt
gaggatatccgtgttcaacgagacaaaggttttggcttcattagatatagtagtcatgct
gaagcagctcgcgctatccaaatgggaaatgctcgaatcctctttggcaaaccgataaag
tgctcatggggcagtaagcctactcctccaggaaccacttctacccctctacctcctcca
gctgcaacccatatgccaggatttacggctgccgatcttgccgcctatgagcggcaactt
gctttgagtagtagaatgatgggtggtgcacaagctctgattcatccacagggtcagcga
cttgccgctgccactcagccaatatatgacaccatgtattcgagcatcagcacatcccaa
caacccatgttctatcagtag
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