Primulina tabacum: 142528728
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Entry
142528728 CDS
T11246
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142528728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142528728
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142528728
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR19_1st
eIF2A
Motif
Other DBs
NCBI-GeneID:
142528728
NCBI-ProteinID:
XP_075489972
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Position
16:complement(29693835..29700785)
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AA seq
437 aa
AA seq
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MPSFPQPGKVTIGEINRELVIADHLSDDQARETYGEILGTVFAPVPFESDSILGTEAEQI
DVLPRQGNSGILSAVVQALMSGSVKPLFEPADVKLLQYVDLHAVSWHSHKRILAFISGPH
QVTICDYDDSDGKSPCVLSSESQKDVKFIEWRPNDGKTLSVACKGGICIWAASYPGNVAS
VRSVVTSSIISRSSSTRWTLVDFLRSDDNEQISALAWSPNGRYLASAAFENSSFTILDVA
QGLGTPFRRGLGGISMLSWSPCGDYFFAAKFDGTFYLWETNTWTSEPWSSKNGYVTGATW
DPDGRMILLSFSESSTLGSIHFASKAPSLDAHLIPVELPEIKSLTGSQVIKNIAWDASGE
RLAASYVDGDELYKGLVALFDVKRTPLISTSLIGFIRGPGDNPKPLAFGFYNKFKQGPLL
SVSWSTGYCCTYPLIFR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtttcctcagccaggcaaggtcacaatcggcgaaatcaacagagaacttgtc
attgcggaccatctcagcgatgatcaggccagggagacctacggggaaattctcggaact
gtatttgctccagttccatttgagtcagatagtattttgggcactgaagctgaacagata
gatgttttgccacggcaaggcaattcaggtattctatctgcagtggtacaggcgctgatg
agcggttctgtaaagcccctttttgagccggctgatgtaaaattactacaatatgttgat
cttcatgctgtaagttggcacagccataagcgtattttagcatttatttctggaccacat
caggtgacaatttgtgattatgatgattctgatgggaagtctccttgtgtattgtccagc
gagtcacaaaaagatgtgaaatttattgagtggagaccaaatgatgggaaaacactttct
gttgcatgcaagggtggcatttgcatttgggctgcttcttatcctggtaatgtcgcatct
gtaagatccgtggtgacgtcaagcatcatttctagaagttctagcactagatggacacta
gtggatttccttcgaagtgatgataatgaacaaataagtgcgcttgcatggagccctaat
ggaagatatttggcatcagctgcatttgagaattcatctttcaccatattggatgtagca
caaggactgggcactcctttccgacgaggtttaggaggcatatcgatgctgagttggtct
ccgtgtggggattatttttttgctgcaaaatttgatgggacattttatctgtgggaaaca
aacacgtggacatcagaaccatggtcctcaaagaatggatatgtcacgggtgcaacgtgg
gatcctgatgggcgtatgatacttctttctttttcagaatcttcaactttaggttccatt
cactttgcatcaaaagctccatcactggatgcacacctcatacccgttgagctgcctgaa
ataaaatctttgacgggcagtcaagttattaagaatatagcttgggatgcctcaggagag
cgattggcagcatcatatgtggatggtgatgagttatacaaaggacttgttgctttattt
gatgttaaaagaacacccttaatttcaacatcattgattggattcatcagaggtcctggg
gacaatccaaagccattggcatttgggttctacaataagtttaaacagggaccattgctt
tcagtgagttggagcactggatattgctgcacttatcctcttatatttcgatga
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