Primulina tabacum: 142528864
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Entry
142528864 CDS
T11246
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142528864
03041 Spliceosome [BR:
ptab03041
]
142528864
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
142528864
Spliceosome [BR:
ptab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
142528864
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_PARP14_3
RRM_7
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
142528864
NCBI-ProteinID:
XP_075490228
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All DBs
Position
16:31971890..31979486
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AA seq
405 aa
AA seq
DB search
MHQQRLKQQQALMQQSLYHPGLLAQPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
LLQEVFANTGPLEGCKLIRKEKSSYGFVDYFDRRSAALAIVTLNGRQLFGQPIKVNWAYA
SSQREDTTNQFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR
NQQEAQSSINDLNGKWLGSRQIRCNWATKGAGLGDDQQSSDLKTIVELTNGTSEDGLEKR
NEDAPENNPHYTTVYVGNLSPEVTSVDLHRHFHALGVGAIEDIRVQRDKGFGFIRYSSHA
EAARAIQMGNARILFGKPIKCSWGSKPTPPGTSSTPLPPPAATYMPGFTAADLAVYERQL
ALSKMMGDAQALMHPQGQRFAAATQPLYDTMYSSIGTSQQPMFYQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcagaggttgaagcaacagcaagcgctaatgcagcaatctctttatcatccg
ggtctccttgctcagcctcagatagagcctatcttgagtggaaatttgcctcccggattt
gattcaagtacatgtcgtagtgtgtatgtcggaaacatccacccacaagttacggaacca
cttcttcaagaggtttttgctaatactggtcctcttgaaggctgcaagctcattcgtaaa
gagaagtcatcatatggctttgtggattactttgatcgccgatcagccgcccttgctatc
gtgactttgaatgggaggcaattgtttggtcaacctattaaagttaactgggcatatgct
agttcgcagagagaggacacgacaaatcaattcaatatttttgttggtgatcttagccca
gaggttacggatgctaccttatttgcatgtttctctgtctatcctagttgttcagatgca
agggtcatgtgggatcagaagactggtcgctcaaggggattcggttttgtttcttttcgt
aatcagcaggaagctcaaagttcaataaatgacttgaatgggaagtggcttggaagtaga
cagatccgctgcaactgggccacaaaaggtgctggtctgggtgatgaccagcagagttct
gatttaaaaaccatcgtggaactaacaaatggaacatcagaagatggtctggaaaagagg
aatgaagatgccccagaaaacaatccacactatacgactgtctatgttggcaatctttct
cctgaagtgacatctgttgatctacaccgtcatttccatgcacttggagttggagcaatt
gaggatatccgtgttcagcgagacaaaggttttggcttcataagatatagtagtcatgct
gaagcagctcgcgctatccaaatgggaaatgctcgaatcctttttggcaaaccgataaag
tgctcatggggtagtaagcctacccctccaggaaccagttctacccctctacctcctcca
gcagcaacttatatgccaggatttacggctgccgatcttgctgtatatgagcggcaactt
gctttgagtaaaatgatgggtgatgcacaagccctgatgcatccacagggtcagcgattt
gctgctgccactcagccgctatatgacaccatgtattcgagcatcggcacatcccaacaa
cccatgttctatcagtag
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