Primulina tabacum: 142528870
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Entry
142528870 CDS
T11246
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ptab Primulina tabacum
Pathway
ptab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142528870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142528870
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142528870
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
F-box-like
LRR_At5g56370
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
142528870
NCBI-ProteinID:
XP_075490240
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Position
16:complement(36047983..36051575)
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AA seq
581 aa
AA seq
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MANSFPEEVLEHVFSFLNTDRDRNAVSLVCKSWYEIERWCRRRIFIGNCYAVEPEVVIRR
FPEVRALEMKGKPHFADFNLVPDGWGAYFYPWVAAMSVAYPLLEEIKLKRMVVTDECLEL
ISKSFKNFKVLVLSSCEGFSTDGLASVAASCRNLSELDLRESEVEDLSGHWLSHFPKNCT
SLMSLNMSCLHSEVNFSTLERLVSRSPNLKTLRLNRAVPLEKLPNLLRQCPQLVELGTGA
YSAEIRSDVFCNLREAFSACKNIKALSGFWDVVPAYLPAVYSTCSGITTLNLSYATVQSS
DLLKLVGNCRNLQRLWVLDYIEDTGLEAIASTCKDLQELRVFPSDPFGGEPNVSLTEQGL
VSVSEGCPKLQSVLYFCRQMSNAALVAIARNRPKMIRFRLCIIEPRAPDYITHEPLDTGF
GAIVENCKELRRLSLSGLLTDRVFKYIGTHAKKLEMLSIAFAGDSDLGLHHILSGCDSLR
KLEIRDCPFGDKALLANASKLETMRSLWMSSCLVSFGACKLLGQMMPKLNVEVIDERGPP
DSRPETCPVEKLYVYRTVAGRRFDMPGFVWTMNEDSELGFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactctttcccggaggaggtcctggagcacgtcttctcgttcctcaacaccgac
agagatcggaacgcggtttcgttggtgtgcaagtcgtggtacgagatcgaacggtggtgc
cgccgccgtattttcatagggaactgctacgccgtcgagccggaggtggtgatccggagg
tttccggaggttagagctctggagatgaaggggaagccgcatttcgctgatttcaacctc
gtgccggacggttggggtgcgtacttctatccgtgggtggcggcgatgtctgtggcctac
ccgttactggaggagatcaagctgaagcgtatggttgtgacggatgagtgtttggagctg
atttccaaatcgtttaagaatttcaaagtcttggtgctctcatcgtgtgaggggttttcg
actgacggtctcgcttcggttgcagctagctgcaggaatctcagtgaacttgatttgagg
gaaagcgaagtagaggacttgagtgggcattggctcagtcattttccaaaaaactgcacc
tcattgatgtctcttaacatgtcgtgcttacactctgaggtgaatttctcaaccttggag
cgtttggtttcacgttcacctaatctgaagacactacggctgaatcgtgctgtacccctt
gagaagcttcctaatctgcttcgccaatgtcctcagttggttgaattgggcactggtgcc
tattcagctgaaatacggtctgatgtcttttgtaacttgagagaagctttttccgcatgt
aagaatattaaagccttgtctggattttgggatgtggtaccagcttatcttccagctgta
tattctacctgctctggaataacaacgctgaatttaagttatgcaacagttcaaagttct
gatcttctcaagcttgtcggtaattgtcgaaatttacagcgtctatgggttctggattac
attgaagacactggccttgaagccattgcctcaacttgcaaggatttgcaggaacttcgt
gtgttcccttcagatccttttgggggagaacctaacgtatctttgacagaacaggggctt
gtctctgtctcagagggctgcccaaagcttcaatctgttctttacttctgtcgccagatg
tcgaatgctgcattagttgctatagcaagaaatcgtccaaagatgatacgcttccgattg
tgcataattgagcctcgagctcctgattacataacccacgaacccctcgatactggtttt
ggagccattgttgagaactgtaaggaattgcgacgcctttccctgtccggcctccttaca
gatcgagttttcaaatatattggaacccatgccaagaaattagagatgctttctatagct
tttgctggggatagtgacttgggcctccatcatatattgtcagggtgcgacagcctccgg
aaactggagatccgagactgtccatttggggacaaggcacttttggccaatgcctccaag
ctggagacaatgcgatccctttggatgtcttcttgcttggtgagctttggagcgtgcaag
cttctaggtcaaatgatgccaaagctcaatgttgaagttattgatgaaagaggtccccct
gattcgagacccgaaacctgtcctgttgagaaactctacgtataccggactgttgctgga
cgaagattcgacatgcctggttttgtttggacaatgaatgaagattcagagttggggttt
tcttga
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