Primulina tabacum: 142529013
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Entry
142529013 CDS
T11246
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ptab Primulina tabacum
Pathway
ptab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142529013
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptab04040
]
142529013
Ion channels [BR:
ptab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142529013
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Proton_antipo_C
Motif
Other DBs
NCBI-GeneID:
142529013
NCBI-ProteinID:
XP_075490484
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Position
2:complement(7635331..7641688)
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AA seq
766 aa
AA seq
DB search
MLANCHDFYWPWHVHLFFINREVINGFLVDIVLCELYVMFDLSGQRDKFQRLDDLDSRLS
SPSSSAVSNKCGFNIDGVGRARHPIRSPAKSFKKGMRKGSQGLKSIGRSLGFGVSRAVFP
EDLRVSEKKIFDPQDKYLTLWNRLFVMSCILGVSVDPLFFYLPVFSQSSSCLDIDRKLAI
TATTLRTVVDAFYLIHMVLQFRTAYIAPSSRVFGRGELVIDPAKIAKRYLKCHFIIDFLA
VLPLPQIIVWKFLQRSKGSDVLATKQALLYIILLQYIPRFLRIFPLTSELKRTSGVFAES
AWAGAVSYLLLYMLASHIVGAFWYLLSVERNDTCWQKACEQTKECHKNFLYCGNQKMNDY
DTWSNISSTVLRSACPVGDENNPPFDFGIFKQALSSDIVSSKDFLSKYCYCLWWGLQNLS
TLGQGLQTSTYPGESIFSIALAILGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQW
MHHRLLPQDLRERVRRYDQYKWLETRGVDEESLVQTLPKDLRRDIKRHLCLALVKRVPLF
ENMDERLLDAICERLKPSLFTENTYIVREGDPVDEMIFLIRGRLESVTTDGGRSGFFNRS
LLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALSADELKFVAGQFRRLHS
RQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKILELRKKEEEAEELAAASSNAGGGSYS
IGATFLASRFAANALRGVHRNRDLKSARELVKLQKPPEPDFTADAD
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgttggctaattgtcatgatttttattggccttggcatgttcatctcttctttataaat
cgagaagtcataaatgggtttttagttgatattgtgttatgtgaattatacgtgatgttt
gatctcagtgggcagcgtgataagtttcaaaggttggatgacctggactccagactttcg
tccccgtcatcttcagctgtatcaaataaatgtggcttcaatattgatggtgttggccgt
gctaggcatccaattcgctctccagcaaagtcctttaagaaaggaatgaggaaaggatcc
caaggactaaaatccataggccggtcccttggatttggcgtctctcgggcggtatttccc
gaagatctcagagtgtcagagaagaagatatttgaccctcaagacaaatatctgacactt
tggaacaggctttttgtaatgtcatgtattctgggtgtatctgtggatccactttttttc
tatcttcccgtttttagtcaatcatcaagctgcttagatatagatcgaaagttagctatc
actgctacgacactgcggacagttgttgatgctttctatcttattcacatggtactccaa
tttcgaacagcttatattgctccatcatctcgagtgtttgggagaggtgaacttgtcata
gatcctgcaaaaattgctaaaagatacttgaagtgtcattttatcattgatttccttgct
gtgctgcccttaccacagattatcgtatggaaatttctgcagaggtcaaaaggctctgac
gtactggcgacaaaacaggctctactttatatcattttgcttcagtatattcctagattt
ctcagaatttttccactcacttcggaattgaaaaggacttctggtgtcttcgctgaatct
gcatgggctggtgcagtttcttatttgctgctgtacatgctcgccagtcatatagttggg
gctttctggtacttattatctgtggaacgtaatgatacctgctggcagaaagcttgtgaa
cagacgaaagaatgccacaaaaatttcttgtattgcgggaatcagaagatgaatgactat
gatacctggagcaacatcagcagtactgtcttaagatcggcttgccctgtgggtgatgag
aataatccgccatttgattttggaatttttaagcaggcgttgtcatctgacattgtttca
tctaaagactttctgtcaaaatactgttactgtctgtggtgggggctgcaaaatttgagc
acacttggccagggacttcaaaccagtacttaccctggagagtctatattcagtatcgcc
cttgccattttgggacttattctctttgcgttgttaattggaaacatgcagacatatctt
cagtcacttactattcgacttgaagagatgagagtaaaacgacgtgactcggagcaatgg
atgcatcatcgcttgctcccccaagatctcagggagcgagttagacggtatgaccagtac
aagtggttggaaacacgtggagttgatgaagaaagtttggtgcaaactctacccaaggat
cttcgaagagacataaaacggcatctctgtctggccctcgtcaaaagggtacctctcttc
gagaatatggatgagaggttgcttgatgccatttgtgagaggctcaagccttctctattc
acggaaaatacttacattgttcgggaaggagatccagttgacgagatgatattcctcatt
cgtggtcgtcttgagagtgtgactaccgatggcggaagaagtggattcttcaaccgaagt
ttactgaaagaaggagatttttgtggggaggagcttttgacctgggctcttgatcccaaa
tctggttctaatctaccatcttctacacgaactgtgaaggctctaactgaagttgaagct
tttgccctttcagctgatgagctaaaatttgtcgctggtcagttcagacgtctccacagt
agacaagtccaacacacattccgtttctactcacagcagtggcgtacttgggctgcttgc
ttcattcaagcagcttggcgtcgctattcaaagaggaaaatcttggaacttagaaagaag
gaagaagaagctgaagagttagctgcagctagcagcaatgctggtggaggctcatacagc
atcggagcaacattcctggcttctcgatttgctgcaaatgctcttcgtggagttcataga
aatcgagatctcaagagtgctcgagagttggtcaaacttcagaagcccccagagcctgat
tttactgcagatgctgattga
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