Primulina tabacum: 142529820
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Entry
142529820 CDS
T11246
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
ptab Primulina tabacum
Pathway
ptab03420
Nucleotide excision repair
ptab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142529820
09124 Replication and repair
03420 Nucleotide excision repair
142529820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ptab03051
]
142529820
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142529820
Proteasome [BR:
ptab03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
142529820
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
142529820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
CUE
UBA_3
Ubiquitin_4
TECR_N
Motif
Other DBs
NCBI-GeneID:
142529820
NCBI-ProteinID:
XP_075491587
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All DBs
Position
16:complement(2366250..2369877)
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AA seq
377 aa
AA seq
DB search
MKLTVKTLKGSHFQISVQPNETIMAVKKSIEDVQGKDNYPFGQQLLIHNGKVLKDESTLA
DNKISEDGFLVVMLSKGKTLGSSGSTSAQLLQLHQLLILLLLLKLHHQRSPLRLQDYLMF
PQQQSMMSLICDLEDPTGTYTQNASSLITGNNLEHTVQQIMDMGGGCWDKETVMRALRAA
YYNPERAVDYLYSGIPESTEVPVPSSQSAMNSVAATAAAQAAPVSGAPNSSPLNLFPQGT
ISGPADAGHGSLDFLRNNPQFQALRSMVHSNPQILQQVLQELGKQNLPLLRLIQENHQEF
LRLVNEPVDDSDGDMFDQGEQEMPHAVSVTPAEQEAIERMEAMGFDRASVIEAFLACDRN
EELAVNYLLENAGDFED
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtgaaaactctgaaaggcagccatttccaaattagcgtccagccaaac
gagacgattatggcagttaagaaaagcatagaagatgtacaaggcaaagataattatcca
tttggtcaacaattgttgatccataatggcaaagtattgaaagacgaaagtaccttggct
gacaacaagatttctgaagatggtttccttgtggtcatgctaagcaagggaaaaactttg
ggctcgagtgggtcgacttctgctcagctcttgcagctgcaccagcttctaatcctactt
ctgctactgaagctccaccaccaacgcagccccctacggttgcaggattatcttatgttt
ccccaacagcaaagtatgatgtctttaatttgtgatttagaggatcctactggtacttac
actcaaaatgcttccagtttaattaccggtaataatcttgagcatactgttcaacaaata
atggatatgggcggtggttgttgggacaaagagactgttatgcgtgcacttcgagctgcg
tattataatccagaaagggcagtggattacttgtattctggaatacctgaaagcactgaa
gttccagtgccatcgtctcaatcagccatgaattctgtggctgcaactgctgccgctcaa
gctgcacctgtgtctggagcaccaaactcatctccattgaatttatttccccaggggacc
atttctggtcctgctgatgctggtcatggatcacttgattttctcaggaacaacccacag
tttcaagcactgcgttcaatggttcattctaatccacaaattctgcagcaagtccttcag
gagctcgggaagcaaaatctacctctcctgagactcatacaagagaaccatcaagagttc
cttcgactagtcaatgaacctgttgatgattctgatggggatatgtttgatcagggagaa
caagaaatgccccatgcagttagtgtcacacctgcagaacaggaggccatcgaaagaatg
gaggccatgggtttcgacagagcttctgtaattgaagcctttttagcatgcgatcgcaac
gaggaattagctgtcaattacttgttggagaatgctggggattttgaggattga
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