Primulina tabacum: 142529897
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Entry
142529897 CDS
T11246
Name
(RefSeq) replication factor C subunit 3-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
ptab Primulina tabacum
Pathway
ptab03030
DNA replication
ptab03410
Base excision repair
ptab03420
Nucleotide excision repair
ptab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142529897
03410 Base excision repair
142529897
03420 Nucleotide excision repair
142529897
03430 Mismatch repair
142529897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptab03032
]
142529897
03036 Chromosome and associated proteins [BR:
ptab03036
]
142529897
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142529897
DNA replication proteins [BR:
ptab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
142529897
DNA Replication Termination Factors
ELG1-RFC complex
142529897
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
142529897
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
142529897
Check point factors
HRAD17(Rad24)-RFC complex
142529897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_5
AAA_16
RuvB_N
nSTAND3
TIP49
CPT
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
142529897
NCBI-ProteinID:
XP_075491704
LinkDB
All DBs
Position
16:complement(27480456..27485298)
Genome browser
AA seq
523 aa
AA seq
DB search
MLANAKVSKESDNHAPNFESTDSISPGDIFFSKDYGGFQKVVLPKNVSVDPRKPLPKPPG
FVDRNPGSQGNKVTLNFNHDIQAISQTTTNSSSVVSRQSSNISDSSGRTSASTKKFIANR
RKGQTDAWFSCIKKGSCKKFQKSPEKERPFDEASFIEKAIVVESLRPFWADKHQPGSLIG
FTCHKQEAQLLQQLKTSEIFPHILLKGPPGSGKKSLTMALLREIYGDPVWNISHDLRYFQ
VMESRPMQVVVPVSSSSHHVELNVYIEPKAAYALTALVKEISSKYTVTPEISTAAMKPEY
KVLVLYDVDKAPENIQHLIKWIMDCYSDSCKLILCCEDDVDILESVKSRCKIIKVEAPVT
HEVMEVLLQIAKREGFELPMSFAAKIATKSKQNLRRAVMALEACKAHNYPFAEDQPIPIG
WEESLVELAADILEDPLPKRLFLIRGKVQKLLADFVHPKLILLKLVEQFLQGVEPKLKRE
LYYWYAYYDKRLPSGTTALLKLEEFVAKFMSIYRKSSSSRHVS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaaatgctaaggtttctaaagaatcggacaatcatgctcccaactttgagagc
actgattccatttctccgggggacattttcttttctaaggactatggtggctttcagaag
gtggtgcttccgaaaaatgttagtgtcgatccaagaaaacctctcccaaaaccacctggt
tttgtcgacagaaatcctggctctcaggggaacaaagtgaccttgaatttcaatcacgat
attcaggcaatttctcaaacaacaacaaactcaagctctgttgtaagccggcaaagtagt
aacataagtgactcgagtggtaggactagtgcgagtacaaaaaaattcatagccaataga
agaaaaggccagacagatgcttggttttcttgcattaagaaaggatcctgcaagaagttt
caaaaatctccagaaaaagagagaccttttgacgaagcttcatttattgagaaagcaatt
gtggtggagagcttgaggccattttgggctgataaacaccagcctggttcattgattgga
ttcacttgccataagcaggaggctcagcttcttcaacaacttaagaccagtgagattttc
cctcatatcttgttgaaaggaccacctggttctggtaagaagtcactgacaatggctctt
ctgcgtgaaatatatggtgatccagtttggaatatatctcatgatttacgatactttcag
gttatggagtcaagacctatgcaagtagttgttcctgtaagctcaagttctcaccatgtg
gaacttaatgtgtacatagagcctaaggcagcatatgcactaacagctttggtcaaggaa
ataagcagcaaatatactgtcaccccagaaatcagcaccgcagctatgaagccagagtat
aaagtattggttctgtatgatgttgacaaagccccagaaaacatacaacaccttataaaa
tggatcatggactgttactcagattcttgtaagttaattctttgctgtgaagatgacgta
gatatccttgagtctgttaagagccgatgcaaaattatcaaggttgaggctcctgtgaca
catgaagtcatggaagttcttctccagatagcaaaaagagaaggttttgaattaccaatg
agctttgctgctaaaattgcaaccaaatcaaagcaaaacctgaggcgagctgtcatggca
cttgaagcctgtaaagcacacaactatccctttgcggaggatcaacctattccaatagga
tgggaagagtccctcgtggaacttgctgctgatattcttgaagatccattgcctaagaga
ttatttctcattcgtgggaaggttcagaagcttcttgctgattttgttcatccaaaattg
attctcctgaaacttgttgaacaattccttcagggagttgagccaaagttgaaaagggaa
ctttactattggtacgcatattatgataaaagactcccaagtggaacaacggccttgcta
aagctagaagaattcgtcgccaaatttatgagtatatataggaaaagctcttcaagtcgg
cacgtctcatag
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