Primulina tabacum: 142529985
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Entry
142529985 CDS
T11246
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptab Primulina tabacum
Pathway
ptab00061
Fatty acid biosynthesis
ptab00071
Fatty acid degradation
ptab01100
Metabolic pathways
ptab01212
Fatty acid metabolism
ptab04146
Peroxisome
Module
ptab_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
142529985
00071 Fatty acid degradation
142529985
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
142529985
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptab01004
]
142529985
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptab04147
]
142529985
Enzymes [BR:
ptab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
142529985
Lipid biosynthesis proteins [BR:
ptab01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
142529985
Exosome [BR:
ptab04147
]
Exosomal proteins
Exosomal proteins of breast milk
142529985
Exosomal proteins of breast cancer cells
142529985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
142529985
NCBI-ProteinID:
XP_075491839
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Position
16:35653002..35657895
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AA seq
661 aa
AA seq
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MKKFAVKVEEGREGRDGKPSVGPVYRNLLAEDAFPSIDPDMSTAWQIFRTSFEKYPDNRM
LGWRELVEGKWGPYKWKTYKEAYEETLLVGSALRAHGIEPGARVGIYGANCPQWIVAMEA
CNAHSLICVPLYDTLGAGAVNYIIDHAELDIVFVQDKKVKQLLSPECTSAQRIKFIVCFS
SLTEEQRDGAAAIDIKPYSWTEFLAVGKEKPSDIFPPKPSDTCTIMYTSGTSGDPKGVIL
THENIVTCISGVEKFMEQFEDKMTVDDVYISFLPLAHILDRMIEEFFFYKGASVGYYHGE
INEIRDDLAELKPTFLAGVPRVFERVHEGVLKAVEELNPRRRKIFSWLYKYKLFWMNRGY
KQKDASPLADLLAFGKVKNRLGGRIRLIVSGGAPLSTEIEEFLRVTSCAFVVQGYGLTES
CGLATLGFPDEMCMIGTVGSSFMYTEIRLKEVPEMGYDPLADPSRGEICIKGKSAFAGYY
KNPELTQEVVQDGWFHTGDIGELSPNGVIRIIDRKKNLIKLSQGEYVAVEYLEKVYGITP
VVEDIWVYGDSFKSKLVAVVVPNEDNTMKWGKQNGHKDSSFVELCSLNQLKDHIILELKS
TADRNKLRGFEYIKEIIVEPELFELSEKELVTATLKKRRDRMLKNYKAEIDGLYQMLNGA
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattcgcggtcaaggtggaagaaggaagggaaggccgagatgggaagccatcc
gttggtcctgtgtaccgtaatctactggcagaagatgcgtttccgtcgattgatcctgac
atgtccaccgcttggcaaattttcagaacttccttcgaaaagtaccctgacaatagaatg
ctgggatggcgtgagttggtcgaggggaagtggggtccttataagtggaagacatacaaa
gaagcgtacgaggagactctgctcgttggttcggcactgcgagcacatggcattgaacct
ggagctcgagttggaatttatggtgcgaattgtcctcagtggattgtggcaatggaggcc
tgcaatgctcacagcttaatttgtgttcctctctacgacactcttggcgctggagcagtg
aattacataatagatcatgctgagcttgatattgttttcgttcaagataagaaagtgaaa
caactactgagccctgaatgcactagtgctcaaaggataaaatttattgtgtgcttctct
tcactgactgaagaacagcgggatggagcggccgctattgacatcaaaccttactcttgg
accgaatttcttgctgtgggaaaagaaaagccatctgacatttttccaccaaagccatcc
gatacatgtacgattatgtatacaagtggaaccagtggagatccaaagggtgtaattttg
acccacgaaaacattgtaacatgcattagtggggtcgaaaaattcatggagcaattcgaa
gacaagatgacagtggacgatgtgtatatatctttcctaccccttgctcacattcttgat
cgcatgattgaagaattcttcttctacaagggtgcttcggtcggatactatcatggggaa
atcaacgaaataagggacgatttggcggagttgaaaccaacatttttggcaggagtacct
cgagtttttgaaagagtgcatgaaggggtcctcaaagcggttgaagagctcaaccctagg
aggagaaagattttcagctggctttacaaatacaaactcttttggatgaatcgcgggtac
aaacagaaagatgcatcaccactggcagatctacttgcttttggaaaggtcaaaaacagg
ttaggtggaaggattcggctcatagtatccgggggcgcgccattgagcactgagatagaa
gaattcctgcgggttacgtcctgtgcttttgtggtacaaggatatgggttgacagagagt
tgtggattggcaacgttggggttcccagatgagatgtgcatgattggaacagttggctct
tctttcatgtataccgaaatccgtctgaaggaagttccagagatgggttacgatccactt
gctgatccttctcgtggtgaaatatgcatcaaagggaaatcagcttttgcaggatactac
aagaatccagagttgactcaagaagttgtgcaagatggatggttccatacaggtgacatt
ggagagttgtcacccaatggagtcattagaattatcgacaggaagaagaatctaatcaag
ctatctcagggagagtacgttgcggtcgaatatcttgaaaaagtttatggtatcaccccg
gttgtggaagatatatgggtgtacggcgatagcttcaagtcgaagctagtcgcagtagtc
gttccaaatgaagacaacaccatgaaatggggaaagcagaacggccataaagattccagc
tttgtggagctatgctctttaaaccagctcaaagatcacatcatccttgagctcaaatcg
acagccgacagaaacaagctgagaggtttcgagtacatcaaagaaataatagtggaacct
gagctcttcgaattgtctgaaaaagaattggtgacagcaacactgaagaagagaagagac
agaatgcttaagaattacaaggcggaaatcgatgggctctatcaaatgctgaacggagct
aagtag
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